RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 EPN1Q9Y6I3 576 aaPredicted RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 AFF2P51816 1311 aa6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 XRN1Q8IZH2 1706 aaKnown RBP6.16□□□□□ -1.42
VTI1BP4-201ENST00000427516 MROH1Q8NDA8 1641 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 RBM47A0AV96 593 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 NRG2O14511 850 aaPredicted RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 FYB1O15117 783 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 CETN3O15182 167 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 WDR46O15213 610 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 SKAP2O75563 359 aaPredicted RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 HOXB7P09629 217 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 LINGO3P0C6S8 592 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 BCRP11274 1271 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 RPL13P26373 211 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLC19A1P41440 591 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 GCGRP47871 477 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 ATP1A2P50993 1020 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 NEK2P51955 445 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 PSMC1P62191 440 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 GUCY1A3Q02108 690 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 RBL2Q08999 1139 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 FLIIQ13045 1269 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 BYSLQ13895 437 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 MORC3Q14149 939 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 ADRM1Q16186 407 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 INAQ16352 499 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 PARP6Q2NL67 630 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 GJC2Q5T442 439 aaPredicted RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 RAD9BQ6WBX8 426 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 DDX46Q7L014 1031 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 TRPM8Q7Z2W7 1104 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 FAM228AQ86W67 206 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 UNC5CLQ8IV45 518 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 MYOCDQ8IZQ8 938 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 SAMD3Q8N6K7 520 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 ANKLE1Q8NAG6 615 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 RDH13Q8NBN7 331 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 IFT81Q8WYA0 676 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 RIN2Q8WYP3 895 aaPredicted RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 KLHL29Q96CT2 875 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZNF570Q96NI8 536 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 NR1H4Q96RI1 486 aaPredicted RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 MMS19Q96T76 1030 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 TUBB6Q9BUF5 446 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 TIPINQ9BVW5 301 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 EIF2AQ9BY44 585 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 AGXT2Q9BYV1 514 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 OSBPL7Q9BZF2 842 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 FAM129AQ9BZQ8 928 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 MAF1Q9H063 256 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 GGNBP2Q9H3C7 697 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCDC134Q9H6E4 229 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 TMBIM4Q9HC24 238 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 FAM114A2Q9NRY5 505 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 DNAAF2Q9NVR5 837 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 MAGEC2Q9UBF1 373 aaPredicted RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 ADD3Q9UEY8 706 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 LIMA1Q9UHB6 759 aaKnown RBP6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 KCNH3Q9ULD8 1083 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 SYNPO2Q9UMS6 1093 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 SSX2IPQ9Y2D8 614 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 LEMD3Q9Y2U8 911 aa6.15□□□□□ -1.42
VTI1BP4-201ENST00000427516 ADGRF5Q8IZF2 1346 aa6.15□□□□□ -1.43
VTI1BP4-201ENST00000427516 SALL1Q9NSC2 1324 aa6.15□□□□□ -1.43
VTI1BP4-201ENST00000427516 CD163L1Q9NR16 1453 aa6.15□□□□□ -1.43
VTI1BP4-201ENST00000427516 NUTM2BA6NNL0 878 aaPredicted RBP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCDC169A6NNP5 214 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 GOLGA8AA7E2F4 631 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 NUTM2EB1AL46 878 aaPredicted RBP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 BTBD19C9JJ37 291 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 WNT7AO00755 349 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATP6V1G1O75348 118 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 FAM200BP0CF97 657 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 VDRP11473 427 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 CALB2P22676 271 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 EEF1GP26641 437 aaKnown RBP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 POLD1P28340 1107 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 SMARCA1P28370 1054 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 CTNNA1P35221 906 aaKnown RBP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PBX1P40424 430 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 MSH2P43246 934 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 GNAQP50148 359 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 POLE2P56282 527 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 TUBA4AP68366 448 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PDE1BQ01064 536 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PTH1RQ03431 593 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 RNASELQ05823 741 aaKnown RBP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 NEXNQ0ZGT2 675 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 FUT2Q10981 343 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 SNX1Q13596 522 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 ITGA9Q13797 1035 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 MYBPC2Q14324 1141 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 MYBPC3Q14896 1274 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 WASHC2DQ5SRD0 308 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 MORN1Q5T089 497 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 TSHZ3Q63HK5 1081 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PHLDB3Q6NSJ2 640 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 LIAT1Q6ZQX7 453 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms