RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 MYH6P13533 1939 aa12.43□□□□□ -0.42
LINC01238-202ENST00000426962 LRRC37A2A6NM11 1700 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 BAZ2BQ9UIF8 2168 aaKnown RBP12.42□□□□□ -0.42
LINC01238-202ENST00000426962 PIK3CDO00329 1044 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 B4GALT4O60513 344 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 SUPT20HL2P0C7V6 817 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 CASTP20810 708 aaKnown RBP12.42□□□□□ -0.42
LINC01238-202ENST00000426962 CCND2P30279 289 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 ARHGAP1Q07960 439 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 LAMC2Q13753 1193 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 NBPF20Q3BBV1 942 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 APOA5Q6Q788 366 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 TMTC3Q6ZXV5 915 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 MICU3Q86XE3 530 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 RAB11FIP4Q86YS3 637 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 TMEM199Q8N511 208 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 EMID1Q96A84 441 aaPredicted RBP12.42□□□□□ -0.42
LINC01238-202ENST00000426962 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 TRPV6Q9H1D0 765 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
LINC01238-202ENST00000426962 BRPF3Q9ULD4 1205 aa12.42□□□□□ -0.42
LINC01238-202ENST00000426962 SZT2Q5T011 3432 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 MEIS2O14770 477 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 ZBTB43O43298 467 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 EPB41L2O43491 1005 aaKnown RBP12.41□□□□□ -0.42
LINC01238-202ENST00000426962 STAM2O75886 525 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 RGS20O76081 388 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 EPHB4P54760 987 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 FGD1P98174 961 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 PTPN11Q06124 597 aaPredicted RBP12.41□□□□□ -0.42
LINC01238-202ENST00000426962 PPIGQ13427 754 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC01238-202ENST00000426962 DGKDQ16760 1214 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 NFRKBQ6P4R8 1299 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 USP17L6PQ6QN14 398 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
LINC01238-202ENST00000426962 PPP1R12CQ9BZL4 782 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 PSTPIP2Q9H939 334 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 SNX14Q9Y5W7 946 aa12.41□□□□□ -0.42
LINC01238-202ENST00000426962 LAMA3Q16787 3333 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 hCG_1642624A0A1W2PR95 340 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 MMP3P08254 477 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 PSMA5P28066 241 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 RCAN1P53805 252 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 RTN1Q16799 776 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
LINC01238-202ENST00000426962 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 BLOC1S2Q6QNY1 142 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 IL31RAQ8NI17 732 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 PPTC7Q8NI37 304 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 JAKMIP1Q96N16 626 aaKnown RBP12.4□□□□□ -0.42
LINC01238-202ENST00000426962 HIPK3Q9H422 1215 aa12.4□□□□□ -0.42
LINC01238-202ENST00000426962 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 LTBP2Q14767 1821 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 KLF18A0A0U1RQI7 1052 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 PPFIA4O75335 1185 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 CSF2RAP15509 400 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 ICAM3P32942 547 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 CYP2C18P33260 490 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 MRPS9P82933 396 aaKnown RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 SP2Q02086 613 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 FAM47CQ5HY64 1035 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 FAM109BQ6ICB4 259 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 XRRA1Q6P2D8 792 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 Q6ZUG5 572 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 C16orf59Q7L2K0 433 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 DEFB123Q8N688 67 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 RNPC3Q96LT9 517 aaKnown RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 NOC4LQ9BVI4 516 aaKnown RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 TRMT13Q9NUP7 481 aaKnown RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
LINC01238-202ENST00000426962 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-202ENST00000426962 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 GOLGA8BA8MQT2 603 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 SPATA31C2B4DYI2 1134 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 GGPS1O95749 300 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 CYP2C9P11712 490 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 CPA1P15085 419 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 RPS6KB1P23443 525 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 CDC27P30260 824 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 CCL23P55773 120 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
LINC01238-202ENST00000426962 FUT2Q10981 343 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 TMEM240Q5SV17 173 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 PCNX4Q63HM2 1172 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 HEATR3Q7Z4Q2 680 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
LINC01238-202ENST00000426962 KAT2BQ92831 832 aa12.38□□□□□ -0.43
LINC01238-202ENST00000426962 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
LINC01238-202ENST00000426962 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01238-202ENST00000426962 KATNAL1Q9BW62 490 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms