RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 BRDTQ58F21 947 aaPredicted RBP11.72□□□□□ -0.53
GACAT3-201ENST00000426539 TTC22Q5TAA0 569 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 MCF2L2Q86YR7 1114 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 RMDN3Q96TC7 470 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 CNNM2Q9H8M5 875 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 MAD2L2Q9UI95 211 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 MRPL11Q9Y3B7 192 aaKnown RBP11.72□□□□□ -0.53
GACAT3-201ENST00000426539 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 SLC4A7Q9Y6M7 1214 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 ZBBXA8MT70 800 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 KLRF2D3W0D1 207 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 RGS20O76081 388 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 GH1P01241 217 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 PFKMP08237 780 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 CYP21A2P08686 494 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 IQCF3P0C7M6 154 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 HSD17B4P51659 736 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 PTH1RQ03431 593 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 GPNMBQ14956 572 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 STXBP2Q15833 593 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 IFIT1BQ5T764 474 aaKnown RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 PPM1EQ8WY54 764 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 DHX38Q92620 1227 aaKnown RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 IWS1Q96ST2 819 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 GAS2L1Q99501 681 aaPredicted RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 SLC28A3Q9HAS3 691 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 PXMP2Q9NR77 195 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 SUPT16HQ9Y5B9 1047 aaKnown RBP11.71□□□□□ -0.53
GACAT3-201ENST00000426539 PCDHA11Q9Y5I1 949 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 PRUNE2Q8WUY3 3088 aa11.71□□□□□ -0.53
GACAT3-201ENST00000426539 ARHGEF15O94989 841 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 CFBP00751 764 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 NR3C2P08235 984 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 ATP2A2P16615 1042 aaKnown RBP11.7□□□□□ -0.54
GACAT3-201ENST00000426539 CHMLP26374 656 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 CHMP4BP1P59074 171 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 ARHGEF16Q5VV41 709 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 GDF6Q6KF10 455 aaPredicted RBP11.7□□□□□ -0.54
GACAT3-201ENST00000426539 CHST3Q7LGC8 479 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 SESTD1Q86VW0 696 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 AMNQ9BXJ7 453 aa11.7□□□□□ -0.54
GACAT3-201ENST00000426539 ZBTB5O15062 677 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 CYTH3O43739 400 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 EIF3JO75822 258 aaKnown RBP11.69□□□□□ -0.54
GACAT3-201ENST00000426539 IGFBP4P22692 258 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
GACAT3-201ENST00000426539 RFC2P35250 354 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 GRM4Q14833 912 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 CCDC85BQ15834 202 aaPredicted RBP11.69□□□□□ -0.54
GACAT3-201ENST00000426539 PTGISQ16647 500 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 STOX1Q6ZVD7 989 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 IL31RAQ8NI17 732 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 EMID1Q96A84 441 aaPredicted RBP11.69□□□□□ -0.54
GACAT3-201ENST00000426539 PDCD2LQ9BRP1 358 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 PCDHA1Q9Y5I3 950 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 VCANP13611 3396 aa11.69□□□□□ -0.54
GACAT3-201ENST00000426539 EPOPA6NHQ4 379 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 HAS3O00219 553 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 RFXAPO00287 272 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 CA3P07451 260 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 HOXD8P13378 290 aaPredicted RBP11.68□□□□□ -0.54
GACAT3-201ENST00000426539 CASTP20810 708 aaKnown RBP11.68□□□□□ -0.54
GACAT3-201ENST00000426539 ANTXR2P58335 489 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 BFSP2Q13515 415 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 HIC1Q14526 733 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 TCTN1Q2MV58 587 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
GACAT3-201ENST00000426539 WNT8BQ93098 351 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
GACAT3-201ENST00000426539 PIGSQ96S52 555 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 HDAC6Q9UBN7 1215 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 GTF2IRD1Q9UHL9 959 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 MRVI1Q9Y6F6 885 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 CHD9Q3L8U1 2897 aa11.68□□□□□ -0.54
GACAT3-201ENST00000426539 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 E7EWF7 191 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 IFIT3O14879 490 aaKnown RBP11.67□□□□□ -0.54
GACAT3-201ENST00000426539 SORBS3O60504 671 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 F2P00734 622 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 MYCLP12524 364 aaPredicted RBP11.67□□□□□ -0.54
GACAT3-201ENST00000426539 ACTN1P12814 892 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 PSEN2P49810 448 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 SP2Q02086 613 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 RBL2Q08999 1139 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 TROAPQ12815 778 aa11.67□□□□□ -0.54
GACAT3-201ENST00000426539 LAMC2Q13753 1193 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms