RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 DHX38Q92620 1227 aaKnown RBP17.19■□□□□ 0.34
PDAP1-202ENST00000426447 KAT2BQ92831 832 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 TTC14Q96N46 770 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 CTAGE1Q96RT6 745 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 KATNAL1Q9BW62 490 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 GTF2IRD1Q9UHL9 959 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 INSL6Q9Y581 213 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 LCTP09848 1927 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 SCN10AQ9Y5Y9 1956 aa17.19■□□□□ 0.34
PDAP1-202ENST00000426447 FGAP02671 866 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 ALADP13716 330 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 MX1P20591 662 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 PSEN2P49810 448 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 ARHGAP1Q07960 439 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 ALX1Q15699 326 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 PTCRAQ6ISU1 281 aaPredicted RBP17.18■□□□□ 0.34
PDAP1-202ENST00000426447 FBXO22Q8NEZ5 403 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.18■□□□□ 0.34
PDAP1-202ENST00000426447 TAAR1Q96RJ0 339 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 UBA5Q9GZZ9 404 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
PDAP1-202ENST00000426447 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
PDAP1-202ENST00000426447 GOLGA8HP0CJ92 632 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 RBL2Q08999 1139 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 PTK7Q13308 1070 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 PTPROQ16827 1216 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 TCTN1Q2MV58 587 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
PDAP1-202ENST00000426447 ZNF618Q5T7W0 954 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 TBC1D5Q92609 795 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 HELLSQ9NRZ9 838 aa17.17■□□□□ 0.34
PDAP1-202ENST00000426447 TRANK1O15050 2925 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 AMHP03971 560 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 IL9P15248 144 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 HAND2P61296 217 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 MFSD10Q14728 455 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 KIAA0753Q2KHM9 967 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 PUS10Q3MIT2 529 aaKnown RBP17.16■□□□□ 0.34
PDAP1-202ENST00000426447 ARHGEF16Q5VV41 709 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 MFSD6Q6ZSS7 791 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 EP400NLQ6ZTU2 488 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 MCF2L2Q86YR7 1114 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 DHX37Q8IY37 1157 aaKnown RBP17.16■□□□□ 0.34
PDAP1-202ENST00000426447 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
PDAP1-202ENST00000426447 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 IWS1Q96ST2 819 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 RMDN3Q96TC7 470 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 C17orf80Q9BSJ5 609 aa17.16■□□□□ 0.34
PDAP1-202ENST00000426447 DDX41Q9UJV9 622 aaKnown RBP17.16■□□□□ 0.34
PDAP1-202ENST00000426447 LGR5O75473 907 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 SNHG28P0DPA3 235 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 LAMC2Q13753 1193 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDAP1-202ENST00000426447 MYOCDQ8IZQ8 938 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 MAF1Q9H063 256 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 CPVLQ9H3G5 476 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 MRVI1Q9Y6F6 885 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 TANC1Q9C0D5 1861 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 ABCB11O95342 1321 aa17.15■□□□□ 0.34
PDAP1-202ENST00000426447 TET1Q8NFU7 2136 aa17.14■□□□□ 0.33
PDAP1-202ENST00000426447 GRXCR2A6NFK2 248 aa17.14■□□□□ 0.33
PDAP1-202ENST00000426447 EIF3JO75822 258 aaKnown RBP17.14■□□□□ 0.33
PDAP1-202ENST00000426447 ZNF286BP0CG31 522 aa17.14■□□□□ 0.33
PDAP1-202ENST00000426447 ZNF200P98182 395 aaPredicted RBP17.14■□□□□ 0.33
PDAP1-202ENST00000426447 CDC37Q16543 378 aaPredicted RBP17.14■□□□□ 0.33
PDAP1-202ENST00000426447 MCMDC2Q4G0Z9 681 aa17.14■□□□□ 0.33
PDAP1-202ENST00000426447 MRPL38Q96DV4 380 aaKnown RBP17.14■□□□□ 0.33
PDAP1-202ENST00000426447 ZKSCAN3Q9BRR0 538 aa17.14■□□□□ 0.33
PDAP1-202ENST00000426447 EMSYQ7Z589 1322 aa17.14■□□□□ 0.33
PDAP1-202ENST00000426447 H3BQ06 376 aaPredicted RBP17.13■□□□□ 0.33
PDAP1-202ENST00000426447 DHX16O60231 1041 aaKnown RBP17.13■□□□□ 0.33
PDAP1-202ENST00000426447 HSPD1P10809 573 aaKnown RBP17.13■□□□□ 0.33
PDAP1-202ENST00000426447 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
PDAP1-202ENST00000426447 THPOP40225 353 aa17.13■□□□□ 0.33
PDAP1-202ENST00000426447 DBF4BQ8NFT6 615 aa17.13■□□□□ 0.33
PDAP1-202ENST00000426447 PPTC7Q8NI37 304 aa17.13■□□□□ 0.33
PDAP1-202ENST00000426447 ESR2Q92731 530 aa17.13■□□□□ 0.33
PDAP1-202ENST00000426447 EMID1Q96A84 441 aaPredicted RBP17.13■□□□□ 0.33
PDAP1-202ENST00000426447 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
PDAP1-202ENST00000426447 FAM50BQ9Y247 325 aa17.13■□□□□ 0.33
PDAP1-202ENST00000426447 MRPL11Q9Y3B7 192 aaKnown RBP17.13■□□□□ 0.33
PDAP1-202ENST00000426447 COL4A4P53420 1690 aaPredicted RBP17.13■□□□□ 0.33
PDAP1-202ENST00000426447 TRIP12Q14669 1992 aaPredicted RBP17.12■□□□□ 0.33
PDAP1-202ENST00000426447 RSPH10B2B2RC85 870 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 F2P00734 622 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 NR3C2P08235 984 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 RSPH10BP0C881 870 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 PCP11498 1178 aaKnown RBP17.12■□□□□ 0.33
PDAP1-202ENST00000426447 TRIM71Q2Q1W2 868 aaKnown RBP17.12■□□□□ 0.33
PDAP1-202ENST00000426447 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 BANK1Q8NDB2 785 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 WNT8BQ93098 351 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 FAM227BQ96M60 508 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 SAMD11Q96NU1 681 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 YME1L1Q96TA2 773 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 RNF41Q9H4P4 317 aaPredicted RBP17.12■□□□□ 0.33
PDAP1-202ENST00000426447 VAT1LQ9HCJ6 419 aa17.12■□□□□ 0.33
PDAP1-202ENST00000426447 RBAK-RBAKDNI3L0D1 243 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms