RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 PRO3102Q9H379 93 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 ZSWIM6Q9HCJ5 1215 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 PDLIM7Q9NR12 457 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 NID2Q14112 1375 aa15.72■□□□□ 0.11
SNX3-204ENST00000426155 MEIS2O14770 477 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 RGS20O76081 388 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 PSMC6P62333 389 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 MDM2Q00987 491 aaPredicted RBP15.71■□□□□ 0.11
SNX3-204ENST00000426155 HABP4Q5JVS0 413 aaKnown RBP15.71■□□□□ 0.11
SNX3-204ENST00000426155 C1orf53Q5VUE5 145 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 CCDC62Q6P9F0 684 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 PPP1R13LQ8WUF5 828 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 IWS1Q96ST2 819 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 MAP3K20Q9NYL2 800 aaKnown RBP15.71■□□□□ 0.11
SNX3-204ENST00000426155 Q9Y3F1 56 aa15.71■□□□□ 0.11
SNX3-204ENST00000426155 SCN10AQ9Y5Y9 1956 aa15.71■□□□□ 0.1
SNX3-204ENST00000426155 FRMPD4Q14CM0 1322 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 LAMA3Q16787 3333 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 TRIM43BA6NCK2 446 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 SORBS3O60504 671 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 TTLL4Q14679 1199 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 SAMD3Q8N6K7 520 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 SMARCC2Q8TAQ2 1214 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 TRIM43Q96BQ3 446 aaPredicted RBP15.7■□□□□ 0.1
SNX3-204ENST00000426155 NCOA5Q9HCD5 579 aaKnown RBP15.7■□□□□ 0.1
SNX3-204ENST00000426155 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
SNX3-204ENST00000426155 V9GY48 417 aaPredicted RBP15.7■□□□□ 0.1
SNX3-204ENST00000426155 GRIN2DO15399 1336 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 EIF3JO75822 258 aaKnown RBP15.69■□□□□ 0.1
SNX3-204ENST00000426155 MYL3P08590 195 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 RCAN1P53805 252 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 CCT2P78371 535 aaKnown RBP15.69■□□□□ 0.1
SNX3-204ENST00000426155 ARHGAP1Q07960 439 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 FBXL16Q8N461 479 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 PHKBQ93100 1093 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 GDF15Q99988 308 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 MRVI1Q9Y6F6 885 aa15.69■□□□□ 0.1
SNX3-204ENST00000426155 ELP1O95163 1332 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 A0A0U1RQG5 324 aaPredicted RBP15.68■□□□□ 0.1
SNX3-204ENST00000426155 STXBP3O00186 592 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 PIK3CDO00329 1044 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 NKRFO15226 690 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNX3-204ENST00000426155 CLTBP09497 229 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 ITGB8P26012 769 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
SNX3-204ENST00000426155 CCND2P30279 289 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 NAPAP54920 295 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 MRPS9P82933 396 aaKnown RBP15.68■□□□□ 0.1
SNX3-204ENST00000426155 PURAQ00577 322 aaKnown RBP15.68■□□□□ 0.1
SNX3-204ENST00000426155 VSIG10LQ86VR7 867 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 AFG1LQ8WV93 481 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 CUL5Q93034 780 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 TM6SF1Q9BZW5 370 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 RTEL1Q9NZ71 1219 aa15.68■□□□□ 0.1
SNX3-204ENST00000426155 DDX41Q9UJV9 622 aaKnown RBP15.68■□□□□ 0.1
SNX3-204ENST00000426155 ARVCFO00192 962 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 GH1P01241 217 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 MMP3P08254 477 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 CPT1AP50416 773 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 CDK7P50613 346 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 FAAP100Q0VG06 881 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 STK3Q13188 491 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 ANKRD33Q7Z3H0 272 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 FAM126BQ8IXS8 530 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 PGBD1Q96JS3 809 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 PDRG1Q9NUG6 133 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 PRKAG2Q9UGJ0 569 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 SZT2Q5T011 3432 aa15.67■□□□□ 0.1
SNX3-204ENST00000426155 A6NJR5 290 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 ADAMTS3O15072 1205 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 ZEB2O60315 1214 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 DTNBO60941 627 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 UBA1P22314 1058 aaKnown RBP15.66■□□□□ 0.1
SNX3-204ENST00000426155 EVCP57679 992 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 SP2Q02086 613 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 SEMA3FQ13275 785 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 ITGA7Q13683 1181 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 NTRK3Q16288 839 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 BADQ92934 168 aa15.66■□□□□ 0.1
SNX3-204ENST00000426155 UBE2OQ9C0C9 1292 aaKnown RBP15.66■□□□□ 0.1
SNX3-204ENST00000426155 CCDC196A0A1B0GTZ2 297 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 GGPS1O95749 300 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 SCG2P13521 617 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 CHMP4BP1P59074 171 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 PKN1Q16512 942 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 PFKFB3Q16875 520 aaPredicted RBP15.65■□□□□ 0.1
SNX3-204ENST00000426155 C8orf34Q49A92 452 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 SLC43A3Q8NBI5 491 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 TOX2Q96NM4 488 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 INPP4AQ96PE3 977 aaPredicted RBP15.65■□□□□ 0.1
SNX3-204ENST00000426155 SLC26A6Q9BXS9 759 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 TMEM39AQ9NV64 488 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 POLR3EQ9NVU0 708 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 TMEM260Q9NX78 707 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 BARHL2Q9NY43 387 aa15.65■□□□□ 0.1
SNX3-204ENST00000426155 PCDHA6Q9UN73 950 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms