RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CALM3P0DP25 149 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 GNAQP50148 359 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 NBPF20Q3BBV1 942 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 CMTR1Q8N1G2 835 aaKnown RBP24.91■■□□□ 1.58
CDCP1-202ENST00000425231 TMEM199Q8N511 208 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 IL31RAQ8NI17 732 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 RNPC3Q96LT9 517 aaKnown RBP24.91■■□□□ 1.58
CDCP1-202ENST00000425231 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.91■■□□□ 1.58
CDCP1-202ENST00000425231 HIPK3Q9H422 1215 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 SLC12A7Q9Y666 1083 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 UMODL1Q5DID0 1318 aa24.91■■□□□ 1.58
CDCP1-202ENST00000425231 MYCLP12524 364 aaPredicted RBP24.9■■□□□ 1.58
CDCP1-202ENST00000425231 EXOSC10Q01780 885 aaKnown RBP24.9■■□□□ 1.58
CDCP1-202ENST00000425231 PPIGQ13427 754 aaKnown RBP eCLIP24.9■■□□□ 1.58
CDCP1-202ENST00000425231 ADCK5Q3MIX3 580 aa24.9■■□□□ 1.58
CDCP1-202ENST00000425231 FCHSD1Q86WN1 690 aa24.9■■□□□ 1.58
CDCP1-202ENST00000425231 NOC4LQ9BVI4 516 aaKnown RBP24.9■■□□□ 1.58
CDCP1-202ENST00000425231 TRMT13Q9NUP7 481 aaKnown RBP24.9■■□□□ 1.58
CDCP1-202ENST00000425231 MMP3P08254 477 aa24.89■■□□□ 1.58
CDCP1-202ENST00000425231 SMAD3P84022 425 aaKnown RBP24.89■■□□□ 1.58
CDCP1-202ENST00000425231 TMEM240Q5SV17 173 aa24.89■■□□□ 1.58
CDCP1-202ENST00000425231 RAB11FIP4Q86YS3 637 aa24.89■■□□□ 1.58
CDCP1-202ENST00000425231 FANCBQ8NB91 859 aa24.89■■□□□ 1.58
CDCP1-202ENST00000425231 EMID1Q96A84 441 aaPredicted RBP24.89■■□□□ 1.58
CDCP1-202ENST00000425231 MRVI1Q9Y6F6 885 aa24.89■■□□□ 1.58
CDCP1-202ENST00000425231 NFRKBQ6P4R8 1299 aa24.88■■□□□ 1.57
CDCP1-202ENST00000425231 PPP1R13LQ8WUF5 828 aa24.88■■□□□ 1.57
CDCP1-202ENST00000425231 SUPT20HL2P0C7V6 817 aa24.87■■□□□ 1.57
CDCP1-202ENST00000425231 DHX32Q7L7V1 743 aaKnown RBP24.87■■□□□ 1.57
CDCP1-202ENST00000425231 ZFP91Q96JP5 570 aaPredicted RBP24.87■■□□□ 1.57
CDCP1-202ENST00000425231 WNT8AQ9H1J5 351 aa24.87■■□□□ 1.57
CDCP1-202ENST00000425231 SEC63Q9UGP8 760 aaKnown RBP24.87■■□□□ 1.57
CDCP1-202ENST00000425231 FRMPD4Q14CM0 1322 aa24.87■■□□□ 1.57
CDCP1-202ENST00000425231 MYH7BA7E2Y1 1941 aa24.87■■□□□ 1.57
CDCP1-202ENST00000425231 ACRP10323 421 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 CYP2C9P11712 490 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 CCND2P30279 289 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 LAMC2Q13753 1193 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 KAT2BQ92831 832 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 TCEANC2Q96MN5 208 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 MEIS2O14770 477 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 CCL23P55773 120 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 SP2Q02086 613 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 PTPN11Q06124 597 aaPredicted RBP24.86■■□□□ 1.57
CDCP1-202ENST00000425231 FAM47CQ5HY64 1035 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 RASIP1Q5U651 963 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 KCNV1Q6PIU1 500 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 APOA5Q6Q788 366 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 USP17L6PQ6QN14 398 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 TMTC3Q6ZXV5 915 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 ZNF365Q70YC5 407 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 MICU3Q86XE3 530 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 DHX37Q8IY37 1157 aaKnown RBP24.86■■□□□ 1.57
CDCP1-202ENST00000425231 KCNB2Q92953 911 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 IL23AQ9NPF7 189 aa24.86■■□□□ 1.57
CDCP1-202ENST00000425231 PIK3CDO00329 1044 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 TGFB3P10600 412 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 CASTP20810 708 aaKnown RBP24.85■■□□□ 1.57
CDCP1-202ENST00000425231 MRPS9P82933 396 aaKnown RBP24.85■■□□□ 1.57
CDCP1-202ENST00000425231 KRT32Q14532 448 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 DGKDQ16760 1214 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 MYSM1Q5VVJ2 828 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 CCDC82Q8N4S0 544 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 PPTC7Q8NI37 304 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 BRPF3Q9ULD4 1205 aa24.85■■□□□ 1.57
CDCP1-202ENST00000425231 hCG_1642624A0A1W2PR95 340 aa24.84■■□□□ 1.57
CDCP1-202ENST00000425231 CELF3Q5SZQ8 465 aaKnown RBP24.84■■□□□ 1.57
CDCP1-202ENST00000425231 GPKOWQ92917 476 aaPredicted RBP eCLIP24.84■■□□□ 1.57
CDCP1-202ENST00000425231 VWCEQ96DN2 955 aa24.84■■□□□ 1.57
CDCP1-202ENST00000425231 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.83■■□□□ 1.57
CDCP1-202ENST00000425231 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.83■■□□□ 1.57
CDCP1-202ENST00000425231 ZNF697Q5TEC3 545 aa24.83■■□□□ 1.57
CDCP1-202ENST00000425231 PSRC1Q6PGN9 363 aaPredicted RBP24.83■■□□□ 1.57
CDCP1-202ENST00000425231 SYNE3Q6ZMZ3 975 aa24.83■■□□□ 1.57
CDCP1-202ENST00000425231 SMARCC2Q8TAQ2 1214 aa24.83■■□□□ 1.57
CDCP1-202ENST00000425231 FAM161BQ96MY7 647 aa24.83■■□□□ 1.57
CDCP1-202ENST00000425231 GUCD1Q96NT3 240 aa24.83■■□□□ 1.57
CDCP1-202ENST00000425231 STXBP5LQ9Y2K9 1186 aa24.83■■□□□ 1.57
CDCP1-202ENST00000425231 HOXD8P13378 290 aaPredicted RBP24.82■■□□□ 1.56
CDCP1-202ENST00000425231 UBA1P22314 1058 aaKnown RBP24.82■■□□□ 1.56
CDCP1-202ENST00000425231 HSDL1Q3SXM5 330 aa24.82■■□□□ 1.56
CDCP1-202ENST00000425231 SESTD1Q86VW0 696 aa24.82■■□□□ 1.56
CDCP1-202ENST00000425231 CUL5Q93034 780 aa24.82■■□□□ 1.56
CDCP1-202ENST00000425231 SCLYQ96I15 445 aa24.82■■□□□ 1.56
CDCP1-202ENST00000425231 INPP4AQ96PE3 977 aaPredicted RBP24.82■■□□□ 1.56
CDCP1-202ENST00000425231 STAM2O75886 525 aa24.81■■□□□ 1.56
CDCP1-202ENST00000425231 GGPS1O95749 300 aa24.81■■□□□ 1.56
CDCP1-202ENST00000425231 HMGB1P09429 215 aaKnown RBP24.81■■□□□ 1.56
CDCP1-202ENST00000425231 HSPA4P34932 840 aa24.81■■□□□ 1.56
CDCP1-202ENST00000425231 CHMP4BP1P59074 171 aa24.81■■□□□ 1.56
CDCP1-202ENST00000425231 HERVK_113Q902F9 699 aa24.81■■□□□ 1.56
CDCP1-202ENST00000425231 TTYH1Q9H313 450 aaPredicted RBP24.81■■□□□ 1.56
CDCP1-202ENST00000425231 SEMA6BQ9H3T3 888 aa24.81■■□□□ 1.56
CDCP1-202ENST00000425231 PSTPIP2Q9H939 334 aa24.81■■□□□ 1.56
CDCP1-202ENST00000425231 SORBS3O60504 671 aa24.8■■□□□ 1.56
CDCP1-202ENST00000425231 PPFIA4O75335 1185 aa24.8■■□□□ 1.56
CDCP1-202ENST00000425231 FGBP02675 491 aa24.8■■□□□ 1.56
CDCP1-202ENST00000425231 ICAM3P32942 547 aa24.8■■□□□ 1.56
CDCP1-202ENST00000425231 FUT2Q10981 343 aa24.8■■□□□ 1.56
CDCP1-202ENST00000425231 SPATA33Q96N06 139 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms