RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 HEATR3Q7Z4Q2 680 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 C3orf20Q8ND61 904 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 WDR66Q8TBY9 1149 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 CEP89Q96ST8 783 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 RUFY1Q96T51 708 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 BLOC1S4Q9NUP1 217 aa16.85■□□□□ 0.29
C9orf3-204ENST00000424143 LDHCP07864 332 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 FCER1AP12319 257 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 ANXA13P27216 316 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 GRB10Q13322 594 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 ITPK1Q13572 414 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 NAB2Q15742 525 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 SLC9C1Q4G0N8 1177 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 ZNF444Q8N0Y2 327 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-204ENST00000424143 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 NYXQ9GZU5 481 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 MLXIPQ9HAP2 919 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-204ENST00000424143 PCDHGC5Q9Y5F6 944 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 FAM169AQ9Y6X4 670 aa16.84■□□□□ 0.29
C9orf3-204ENST00000424143 BAG3O95817 575 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 MYBP10242 640 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 USP8P40818 1118 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 TMEM119Q4V9L6 283 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 LRIG3Q6UXM1 1119 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 ZC3H3Q8IXZ2 948 aaKnown RBP16.83■□□□□ 0.28
C9orf3-204ENST00000424143 BCAS4Q8TDM0 211 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 HDAC7Q8WUI4 952 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 LARP4BQ92615 738 aaKnown RBP16.83■□□□□ 0.28
C9orf3-204ENST00000424143 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
C9orf3-204ENST00000424143 MKNK2Q9HBH9 465 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 NAV1Q8NEY1 1877 aa16.83■□□□□ 0.28
C9orf3-204ENST00000424143 COL24A1Q17RW2 1714 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 SMCO2A6NFE2 343 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 MYMKA6NI61 221 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 LRRC53A6NM62 1247 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 VGLL3A8MV65 326 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 BHMG1C9JSJ3 638 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-204ENST00000424143 KLRF2D3W0D1 207 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 CCNT1O60563 726 aaKnown RBP16.82■□□□□ 0.28
C9orf3-204ENST00000424143 PLEKP08567 350 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-204ENST00000424143 USP17L8P0C7I0 530 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 NAPAP54920 295 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 GNGT1P63211 74 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 TMEM266Q2M3C6 531 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 SOGA3Q5TF21 947 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 NFRKBQ6P4R8 1299 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
C9orf3-204ENST00000424143 MICALCLQ6ZW33 695 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 RRAGAQ7L523 313 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 NEDD1Q8NHV4 660 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 RAD54LQ92698 747 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 PNMA5Q96PV4 448 aa16.82■□□□□ 0.28
C9orf3-204ENST00000424143 HMGB1P1B2RPK0 211 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 ERLIN2O94905 339 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 CCT5P48643 541 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 FKBP3Q00688 224 aaKnown RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 EVX2Q03828 476 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 CDC37Q16543 378 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 TTMPQ5BVD1 217 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 HYIQ5T013 277 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 CFAP58Q5T655 872 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 PPP1R18Q6NYC8 613 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 GSPT2Q8IYD1 628 aaKnown RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 TSEN2Q8NCE0 465 aaKnown RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 CELF1Q92879 486 aaKnown RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 RIOX1Q9H6W3 641 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 MMRN2Q9H8L6 949 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 AIPL1Q9NZN9 384 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 TMEM59LQ9UK28 342 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 EPHB6O15197 1021 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 RASA1P20936 1047 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 PRDX5P30044 214 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 KCNMA1Q12791 1236 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 MEI1Q5TIA1 1274 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 PPP4R3AQ6IN85 833 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 C3orf67Q6ZVT6 689 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 DZIP1Q86YF9 867 aaKnown RBP16.81■□□□□ 0.28
C9orf3-204ENST00000424143 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
C9orf3-204ENST00000424143 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
C9orf3-204ENST00000424143 FSBPO95073 299 aa16.8■□□□□ 0.28
C9orf3-204ENST00000424143 HSPA9P38646 679 aaKnown RBP16.8■□□□□ 0.28
C9orf3-204ENST00000424143 TECP42680 631 aa16.8■□□□□ 0.28
C9orf3-204ENST00000424143 GTF2A1P52655 376 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-204ENST00000424143 DRP2Q13474 957 aa16.8■□□□□ 0.28
C9orf3-204ENST00000424143 CACNA2D4Q7Z3S7 1137 aa16.8■□□□□ 0.28
C9orf3-204ENST00000424143 REXO1Q8N1G1 1221 aaKnown RBP16.8■□□□□ 0.28
C9orf3-204ENST00000424143 SMCR8Q8TEV9 937 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-204ENST00000424143 ARL8AQ96BM9 186 aa16.8■□□□□ 0.28
C9orf3-204ENST00000424143 MTMR8Q96EF0 704 aa16.8■□□□□ 0.28
C9orf3-204ENST00000424143 INPP4AQ96PE3 977 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-204ENST00000424143 ZIM3Q96PE6 472 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms