RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 DCDC2CA8MYV0 355 aa20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 MEIS2O14770 477 aa20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 CD4P01730 458 aa20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 CPT1AP50416 773 aa20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 USP17L6PQ6QN14 398 aa20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 TMEM39AQ9NV64 488 aa20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 DDX41Q9UJV9 622 aaKnown RBP20.6■□□□□ 0.89
SBDSP1-202ENST00000423945 MROH7Q68CQ1 1323 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 ZBTB43O43298 467 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 MYL3P08590 195 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 MYCLP12524 364 aaPredicted RBP20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 CDC27P30260 824 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 Q6ZUG5 572 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 LRCH3Q96II8 777 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 USP26Q9BXU7 913 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 POLR3EQ9NVU0 708 aa20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 SEC63Q9UGP8 760 aaKnown RBP20.59■□□□□ 0.89
SBDSP1-202ENST00000423945 PIK3CDO00329 1044 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 EPB41L2O43491 1005 aaKnown RBP20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 RPS6KB1P23443 525 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 EPHB4P54760 987 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 MRPS9P82933 396 aaKnown RBP20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 APOBRQ0VD83 1088 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 RTN1Q16799 776 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 LRIT3Q3SXY7 679 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 BLOC1S2Q6QNY1 142 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 SYNE3Q6ZMZ3 975 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 AGXT2Q9BYV1 514 aa20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
SBDSP1-202ENST00000423945 GOLGA8AA7E2F4 631 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 GOLGA8BA8MQT2 603 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 GH1P01241 217 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 RAG1P15918 1043 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 C9orf50Q5SZB4 431 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 TYW1BQ6NUM6 668 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 FBXL16Q8N461 479 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 PPP1R13LQ8WUF5 828 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 BRF1Q92994 677 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 MTG1Q9BT17 334 aaPredicted RBP20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 DOCK5Q9H7D0 1870 aa20.57■□□□□ 0.88
SBDSP1-202ENST00000423945 B4GALT4O60513 344 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 TIMP1P01033 207 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 MMP3P08254 477 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 CCND2P30279 289 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 RCAN1P53805 252 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 SP2Q02086 613 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 SHHQ15465 462 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 WWC2Q6AWC2 1192 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 TRPV6Q9H1D0 765 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 MRVI1Q9Y6F6 885 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 NID2Q14112 1375 aa20.56■□□□□ 0.88
SBDSP1-202ENST00000423945 CASTP20810 708 aaKnown RBP20.55■□□□□ 0.88
SBDSP1-202ENST00000423945 ADD1P35611 737 aaKnown RBP20.55■□□□□ 0.88
SBDSP1-202ENST00000423945 SEMA3FQ13275 785 aa20.55■□□□□ 0.88
SBDSP1-202ENST00000423945 SMARCC2Q8TAQ2 1214 aa20.55■□□□□ 0.88
SBDSP1-202ENST00000423945 EMID1Q96A84 441 aaPredicted RBP20.55■□□□□ 0.88
SBDSP1-202ENST00000423945 BCAS3Q9H6U6 928 aa20.55■□□□□ 0.88
SBDSP1-202ENST00000423945 UMODL1Q5DID0 1318 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 TLR3O15455 904 aaKnown RBP20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 UBA1P22314 1058 aaKnown RBP20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 UBE2SQ16763 222 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 NBPF20Q3BBV1 942 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 KAT2BQ92831 832 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 INPP4AQ96PE3 977 aaPredicted RBP20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 SEZ6LQ9BYH1 1024 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 ALDH8A1Q9H2A2 487 aaPredicted RBP20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 PSTPIP2Q9H939 334 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 ZSWIM6Q9HCJ5 1215 aa20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 V9GY48 417 aaPredicted RBP20.54■□□□□ 0.88
SBDSP1-202ENST00000423945 KPNA6O60684 536 aa20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 PSMA5P28066 241 aa20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 TOB2Q14106 344 aaPredicted RBP20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 BRDTQ58F21 947 aaPredicted RBP20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 MYSM1Q5VVJ2 828 aa20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 MFSD5Q6N075 450 aa20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 CUL5Q93034 780 aa20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 PPP1R12CQ9BZL4 782 aa20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 TRMT13Q9NUP7 481 aaKnown RBP20.53■□□□□ 0.88
SBDSP1-202ENST00000423945 STXBP3O00186 592 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 SORBS3O60504 671 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 HOXD8P13378 290 aaPredicted RBP20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 ICAM3P32942 547 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 METAP2P50579 478 aaKnown RBP eCLIP20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 EVCP57679 992 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 FGD1P98174 961 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 FPGSQ05932 587 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 CELF3Q5SZQ8 465 aaKnown RBP20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 PCNX4Q63HM2 1172 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 KCNV1Q6PIU1 500 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 RUFY3Q7L099 469 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 C16orf59Q7L2K0 433 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 DHX37Q8IY37 1157 aaKnown RBP20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 NAP1L2Q9ULW6 460 aaPredicted RBP20.52■□□□□ 0.88
SBDSP1-202ENST00000423945 GGPS1O95749 300 aa20.51■□□□□ 0.87
SBDSP1-202ENST00000423945 TGFB3P10600 412 aa20.51■□□□□ 0.87
SBDSP1-202ENST00000423945 CYP2C18P33260 490 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms