RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RAB11FIP4Q86YS3 637 aa17.59■□□□□ 0.41
USB1-202ENST00000423271 CTCFLQ8NI51 663 aaPredicted RBP17.59■□□□□ 0.41
USB1-202ENST00000423271 ZFP91Q96JP5 570 aaPredicted RBP17.59■□□□□ 0.41
USB1-202ENST00000423271 TTYH1Q9H313 450 aaPredicted RBP17.59■□□□□ 0.41
USB1-202ENST00000423271 DDX41Q9UJV9 622 aaKnown RBP17.59■□□□□ 0.41
USB1-202ENST00000423271 EYSQ5T1H1 3165 aa17.59■□□□□ 0.41
USB1-202ENST00000423271 GCOM1H8Y6P7 765 aaPredicted RBP17.58■□□□□ 0.4
USB1-202ENST00000423271 KPNA6O60684 536 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 RGS20O76081 388 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 PLEKHA8P1O95397 391 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 POLR2MP0CAP2 368 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 PGM5Q15124 567 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 RASIP1Q5U651 963 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 PSRC1Q6PGN9 363 aaPredicted RBP17.58■□□□□ 0.4
USB1-202ENST00000423271 NFXL1Q6ZNB6 911 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 FCHSD1Q86WN1 690 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 SCLYQ96I15 445 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 TMEM87BQ96K49 555 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 MAP3K14Q99558 947 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 MTA3Q9BTC8 594 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 SPZ1Q9BXG8 430 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 IL23AQ9NPF7 189 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 MAP3K20Q9NYL2 800 aaKnown RBP17.58■□□□□ 0.4
USB1-202ENST00000423271 MRVI1Q9Y6F6 885 aa17.58■□□□□ 0.4
USB1-202ENST00000423271 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 KIF5BP33176 963 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 CHMP4BP1P59074 171 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 TRAF1Q13077 416 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 NFRKBQ6P4R8 1299 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 CMTR1Q8N1G2 835 aaKnown RBP17.57■□□□□ 0.4
USB1-202ENST00000423271 SAMD3Q8N6K7 520 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 VWCEQ96DN2 955 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 SEMA6BQ9H3T3 888 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 MYH7BA7E2Y1 1941 aa17.57■□□□□ 0.4
USB1-202ENST00000423271 SCN5AQ14524 2016 aa17.56■□□□□ 0.4
USB1-202ENST00000423271 GRXCR1A8MXD5 290 aa17.56■□□□□ 0.4
USB1-202ENST00000423271 SORBS3O60504 671 aa17.56■□□□□ 0.4
USB1-202ENST00000423271 CDC45O75419 566 aa17.56■□□□□ 0.4
USB1-202ENST00000423271 VSIG10LQ86VR7 867 aa17.56■□□□□ 0.4
USB1-202ENST00000423271 SRBD1Q8N5C6 995 aaKnown RBP17.56■□□□□ 0.4
USB1-202ENST00000423271 KAT2BQ92831 832 aa17.56■□□□□ 0.4
USB1-202ENST00000423271 GPKOWQ92917 476 aaPredicted RBP eCLIP17.56■□□□□ 0.4
USB1-202ENST00000423271 RRP36Q96EU6 259 aaKnown RBP17.56■□□□□ 0.4
USB1-202ENST00000423271 CXXC1Q9P0U4 656 aaPredicted RBP17.56■□□□□ 0.4
USB1-202ENST00000423271 A0A0C4DFX4 3053 aa17.55■□□□□ 0.4
USB1-202ENST00000423271 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.55■□□□□ 0.4
USB1-202ENST00000423271 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.55■□□□□ 0.4
USB1-202ENST00000423271 SUPT20HL2P0C7V6 817 aa17.55■□□□□ 0.4
USB1-202ENST00000423271 DNAJB2P25686 324 aa17.55■□□□□ 0.4
USB1-202ENST00000423271 CCND2P30279 289 aa17.55■□□□□ 0.4
USB1-202ENST00000423271 LIFRP42702 1097 aa17.55■□□□□ 0.4
USB1-202ENST00000423271 EMID1Q96A84 441 aaPredicted RBP17.55■□□□□ 0.4
USB1-202ENST00000423271 CDX2Q99626 313 aaPredicted RBP17.55■□□□□ 0.4
USB1-202ENST00000423271 UNC80Q8N2C7 3258 aa17.55■□□□□ 0.4
USB1-202ENST00000423271 TANC1Q9C0D5 1861 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 FRMPD4Q14CM0 1322 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 ZNF286BP0CG31 522 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 UBA1P22314 1058 aaKnown RBP17.54■□□□□ 0.4
USB1-202ENST00000423271 PBX2P40425 430 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 PTPN11Q06124 597 aaPredicted RBP17.54■□□□□ 0.4
USB1-202ENST00000423271 DGKDQ16760 1214 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 OTOP2Q7RTS6 562 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 DHX37Q8IY37 1157 aaKnown RBP17.54■□□□□ 0.4
USB1-202ENST00000423271 RASEFQ8IZ41 740 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 TMTC2Q8N394 836 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 HERVK_113Q902F9 699 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 TCEANC2Q96MN5 208 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
USB1-202ENST00000423271 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
USB1-202ENST00000423271 hCG_1642624A0A1W2PR95 340 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 GGPS1O95749 300 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 FGBP02675 491 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 CASTP20810 708 aaKnown RBP17.53■□□□□ 0.4
USB1-202ENST00000423271 SMARCA1P28370 1054 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 GNAQP50148 359 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 MRPS9P82933 396 aaKnown RBP17.53■□□□□ 0.4
USB1-202ENST00000423271 SP2Q02086 613 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 LAMC2Q13753 1193 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 RNF20Q5VTR2 975 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 USP17L6PQ6QN14 398 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 MICU3Q86XE3 530 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 PPTC7Q8NI37 304 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 CTAGE1Q96RT6 745 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 PBX4Q9BYU1 374 aa17.53■□□□□ 0.4
USB1-202ENST00000423271 GBF1Q92538 1859 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 CALM1P0DP23 149 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 CALM2P0DP24 149 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 CALM3P0DP25 149 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 PSEN2P49810 448 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 ADCK5Q3MIX3 580 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 HSDL1Q3SXM5 330 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 CELF3Q5SZQ8 465 aaKnown RBP17.52■□□□□ 0.4
USB1-202ENST00000423271 GDF6Q6KF10 455 aaPredicted RBP17.52■□□□□ 0.4
USB1-202ENST00000423271 TMTC3Q6ZXV5 915 aa17.52■□□□□ 0.4
USB1-202ENST00000423271 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms