RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 AK2P54819 239 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 GJA9P57773 515 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
HERC3-204ENST00000422770 ANKRD1Q15327 319 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 LY6KQ17RY6 165 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 TRIM60Q495X7 471 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 DUSP28Q4G0W2 176 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 BRDTQ58F21 947 aaPredicted RBP11.1□□□□□ -0.63
HERC3-204ENST00000422770 PGBD1Q96JS3 809 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 GLT1D1Q96MS3 346 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 AGXT2Q9BYV1 514 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 UPF3AQ9H1J1 476 aaKnown RBP11.1□□□□□ -0.63
HERC3-204ENST00000422770 RTEL1Q9NZ71 1219 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
HERC3-204ENST00000422770 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
HERC3-204ENST00000422770 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 NID2Q14112 1375 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 hCG_1984214I3L0E3 225 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 STXBP3O00186 592 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 NKRFO15226 690 aaKnown RBP eCLIP11.09□□□□□ -0.63
HERC3-204ENST00000422770 PQBP1O60828 265 aaKnown RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 EIF3JO75822 258 aaKnown RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 GH1P01241 217 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 CPT1AP50416 773 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 FUT2Q10981 343 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 PFKFB3Q16875 520 aaPredicted RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 GNPTABQ3T906 1256 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 CXCL17Q6UXB2 119 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 SLC39A5Q6ZMH5 540 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 FBXL16Q8N461 479 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 ZNF713Q8N859 430 aaPredicted RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 CCDC12Q8WUD4 166 aaPredicted RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 IL17RAQ96F46 866 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 TSEN34Q9BSV6 310 aaKnown RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 BARHL2Q9NY43 387 aa11.09□□□□□ -0.63
HERC3-204ENST00000422770 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
HERC3-204ENST00000422770 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 MEIS2O14770 477 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 PRPF3O43395 683 aaKnown RBP11.08□□□□□ -0.64
HERC3-204ENST00000422770 DTNBO60941 627 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 CDKL5O76039 1030 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 ARIH2O95376 493 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
HERC3-204ENST00000422770 CST5P28325 142 aaPredicted RBP11.08□□□□□ -0.64
HERC3-204ENST00000422770 GHRHRQ02643 423 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 BECN1Q14457 450 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 FAM47CQ5HY64 1035 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 DHX37Q8IY37 1157 aaKnown RBP11.08□□□□□ -0.64
HERC3-204ENST00000422770 KLHDC9Q8NEP7 349 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 CCDC148Q8NFR7 591 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 RNF26Q9BY78 433 aaPredicted RBP11.08□□□□□ -0.64
HERC3-204ENST00000422770 C6orf50Q9HD87 102 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 RIC8AQ9NPQ8 531 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 PKD2L1Q9P0L9 805 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 VPS54Q9P1Q0 977 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 TPCN1Q9ULQ1 816 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 PCDHA6Q9UN73 950 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 PCDHA8Q9Y5H6 950 aa11.08□□□□□ -0.64
HERC3-204ENST00000422770 LTBP2Q14767 1821 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
HERC3-204ENST00000422770 RBM47A0AV96 593 aaKnown RBP11.07□□□□□ -0.64
HERC3-204ENST00000422770 DCDC2CA8MYV0 355 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 IFNAR1P17181 557 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 ZNF76P36508 570 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 EVCP57679 992 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 NLRP5P59047 1200 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 PSMC6P62333 389 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 SP4Q02446 784 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 NLRX1Q86UT6 975 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 AFG1LQ8WV93 481 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 ANO3Q9BYT9 981 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 GLT8D2Q9H1C3 349 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 POLR3EQ9NVU0 708 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 TMEM260Q9NX78 707 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 Q9Y3F1 56 aa11.07□□□□□ -0.64
HERC3-204ENST00000422770 CTAGE5O15320 804 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 CABYRO75952 493 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 DEXIO95424 95 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 GGPS1O95749 300 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 FOSBP53539 338 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 MDM2Q00987 491 aaPredicted RBP11.06□□□□□ -0.64
HERC3-204ENST00000422770 TLE2Q04725 743 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 SCRN1Q12765 414 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 NTRK3Q16288 839 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 PCNX4Q63HM2 1172 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 CCSAPQ6IQ19 270 aaPredicted RBP11.06□□□□□ -0.64
HERC3-204ENST00000422770 KCNV1Q6PIU1 500 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 REXO1Q8N1G1 1221 aaKnown RBP11.06□□□□□ -0.64
HERC3-204ENST00000422770 PPP1R13LQ8WUF5 828 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 SPATA33Q96N06 139 aa11.06□□□□□ -0.64
HERC3-204ENST00000422770 LBHD1Q9BQE6 289 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms