RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 TANGO6Q9C0B7 1094 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 TBC1D7Q9P0N9 293 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 SNX12Q9UMY4 172 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 SLC7A5Q01650 507 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 ACBD3Q9H3P7 528 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 RIOX1Q9H6W3 641 aa17.54■□□□□ 0.4
CDH1-202ENST00000422392 GGCXP38435 758 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 ADCY7P51828 1080 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 CDK17Q00537 523 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 APBA1Q02410 837 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 GFPT1Q06210 699 aaPredicted RBP17.53■□□□□ 0.4
CDH1-202ENST00000422392 MAN2A1Q16706 1144 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 RAD54LQ92698 747 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 LRRC1Q9BTT6 524 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 FGFBP2Q9BYJ0 223 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 MED4Q9NPJ6 270 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 NLRC4Q9NPP4 1024 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 DMGDHQ9UI17 866 aaKnown RBP17.53■□□□□ 0.4
CDH1-202ENST00000422392 TRIM66O15016 1216 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 USO1O60763 962 aaKnown RBP17.53■□□□□ 0.4
CDH1-202ENST00000422392 MAP9Q49MG5 647 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 CCNI2Q6ZMN8 369 aaPredicted RBP17.53■□□□□ 0.4
CDH1-202ENST00000422392 LRRC55Q6ZSA7 311 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 TMC4Q7Z404 712 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 TRIM58Q8NG06 486 aa17.53■□□□□ 0.4
CDH1-202ENST00000422392 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.4
CDH1-202ENST00000422392 F8W031 263 aaPredicted RBP17.52■□□□□ 0.4
CDH1-202ENST00000422392 RGL2O15211 777 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 BUB1O43683 1085 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 TACC1O75410 805 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 PRPF6O94906 941 aaKnown RBP17.52■□□□□ 0.4
CDH1-202ENST00000422392 AKR1B1P15121 316 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 NT5C2P49902 561 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 FXR2P51116 673 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDH1-202ENST00000422392 TMEM266Q2M3C6 531 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 RPGRQ92834 1020 aaKnown RBP17.52■□□□□ 0.4
CDH1-202ENST00000422392 RPGRIP1Q96KN7 1286 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 STK17AQ9UEE5 414 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 JRKLQ9Y4A0 524 aa17.52■□□□□ 0.4
CDH1-202ENST00000422392 HNRNPH3P31942 346 aaKnown RBP17.52■□□□□ 0.39
CDH1-202ENST00000422392 SLC16A2P36021 539 aa17.52■□□□□ 0.39
CDH1-202ENST00000422392 PPP1R2P41236 205 aa17.52■□□□□ 0.39
CDH1-202ENST00000422392 CACNB1Q02641 598 aaPredicted RBP17.52■□□□□ 0.39
CDH1-202ENST00000422392 SKIDA1Q1XH10 827 aa17.52■□□□□ 0.39
CDH1-202ENST00000422392 COBLL1Q53SF7 1204 aa17.52■□□□□ 0.39
CDH1-202ENST00000422392 TTBK2Q6IQ55 1244 aa17.52■□□□□ 0.39
CDH1-202ENST00000422392 GUF1Q8N442 669 aaKnown RBP17.52■□□□□ 0.39
CDH1-202ENST00000422392 BAP1Q92560 729 aa17.52■□□□□ 0.39
CDH1-202ENST00000422392 TSGA10Q9BZW7 698 aa17.52■□□□□ 0.39
CDH1-202ENST00000422392 PVALEFA0A1B0GWK0 134 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 AGPSO00116 658 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 PPP1R11O60927 126 aaPredicted RBP17.51■□□□□ 0.39
CDH1-202ENST00000422392 SSBP05455 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDH1-202ENST00000422392 AARSP49588 968 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDH1-202ENST00000422392 RASSF7Q02833 373 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 DPP8Q6V1X1 898 aaPredicted RBP17.51■□□□□ 0.39
CDH1-202ENST00000422392 VIPAS39Q9H9C1 493 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 TMEM51Q9NW97 253 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 MTMR4Q9NYA4 1195 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 DNA2P51530 1060 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 KCNMA1Q12791 1236 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 KRT79Q5XKE5 535 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 OSBPL9Q96SU4 736 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 CRACR2AQ9BSW2 395 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 POLLQ9UGP5 575 aa17.51■□□□□ 0.39
CDH1-202ENST00000422392 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
CDH1-202ENST00000422392 ESYT2A0FGR8 921 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 MCM3P25205 808 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 SLC1A4P43007 532 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 MAGEA1P43355 309 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 TDRD12Q587J7 1177 aaKnown RBP17.5■□□□□ 0.39
CDH1-202ENST00000422392 FAM196AQ6ZSG2 479 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 C10orf67Q8IYJ2 551 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 TRIM34Q9BYJ4 488 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 FEZ2Q9UHY8 353 aaPredicted RBP17.5■□□□□ 0.39
CDH1-202ENST00000422392 GGA1Q9UJY5 639 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 LRRC31Q6UY01 552 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 NELFCDQ8IXH7 590 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
CDH1-202ENST00000422392 SPATA4Q8NEY3 305 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 HAS1Q92839 578 aa17.5■□□□□ 0.39
CDH1-202ENST00000422392 CWC15Q9P013 229 aaKnown RBP17.5■□□□□ 0.39
CDH1-202ENST00000422392 NPHP3-ACAD11A0A0J9YXS1 232 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 MYO1CO00159 1063 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 NAP1L1P55209 391 aaKnown RBP17.49■□□□□ 0.39
CDH1-202ENST00000422392 COASYQ13057 564 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 ENOX2Q16206 610 aaKnown RBP17.49■□□□□ 0.39
CDH1-202ENST00000422392 CCDC84Q86UT8 332 aaPredicted RBP17.49■□□□□ 0.39
CDH1-202ENST00000422392 ADGRF4Q8IZF3 695 aa17.49■□□□□ 0.39
CDH1-202ENST00000422392 NGLY1Q96IV0 654 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms