RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PRKAG2Q9UGJ0 569 aa30.39■■■□□ 2.46
CDK9-202ENST00000421939 MAGEA10P43363 369 aaPredicted RBP30.38■■■□□ 2.45
CDK9-202ENST00000421939 BRDTQ58F21 947 aaPredicted RBP30.38■■■□□ 2.45
CDK9-202ENST00000421939 PPP1R18Q6NYC8 613 aa30.38■■■□□ 2.45
CDK9-202ENST00000421939 PDLIM7Q9NR12 457 aa30.38■■■□□ 2.45
CDK9-202ENST00000421939 MRVI1Q9Y6F6 885 aa30.38■■■□□ 2.45
CDK9-202ENST00000421939 TRIOBPQ9H2D6 2365 aa30.37■■■□□ 2.45
CDK9-202ENST00000421939 hCG_1984214I3L0E3 225 aa30.37■■■□□ 2.45
CDK9-202ENST00000421939 LY6KQ17RY6 165 aa30.37■■■□□ 2.45
CDK9-202ENST00000421939 ANKRD33Q7Z3H0 272 aa30.37■■■□□ 2.45
CDK9-202ENST00000421939 ZNF713Q8N859 430 aaPredicted RBP30.37■■■□□ 2.45
CDK9-202ENST00000421939 GDF15Q99988 308 aa30.37■■■□□ 2.45
CDK9-202ENST00000421939 PRDM5Q9NQX1 630 aaPredicted RBP30.37■■■□□ 2.45
CDK9-202ENST00000421939 PCDH10Q9P2E7 1040 aa30.37■■■□□ 2.45
CDK9-202ENST00000421939 MROH7Q68CQ1 1323 aa30.37■■■□□ 2.45
CDK9-202ENST00000421939 RGS20O76081 388 aa30.36■■■□□ 2.45
CDK9-202ENST00000421939 GH1P01241 217 aa30.36■■■□□ 2.45
CDK9-202ENST00000421939 PDIA3P30101 505 aaKnown RBP30.36■■■□□ 2.45
CDK9-202ENST00000421939 NAPAP54920 295 aa30.36■■■□□ 2.45
CDK9-202ENST00000421939 HABP4Q5JVS0 413 aaKnown RBP30.36■■■□□ 2.45
CDK9-202ENST00000421939 TOX2Q96NM4 488 aa30.36■■■□□ 2.45
CDK9-202ENST00000421939 PDRG1Q9NUG6 133 aa30.36■■■□□ 2.45
CDK9-202ENST00000421939 POLR3EQ9NVU0 708 aa30.36■■■□□ 2.45
CDK9-202ENST00000421939 RBM27Q9P2N5 1060 aaKnown RBP30.36■■■□□ 2.45
CDK9-202ENST00000421939 DDX41Q9UJV9 622 aaKnown RBP30.36■■■□□ 2.45
CDK9-202ENST00000421939 A6NJR5 290 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 STXBP3O00186 592 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 ARVCFO00192 962 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 CLTBP09497 229 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 ARHGAP1Q07960 439 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 UBE2SQ16763 222 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 TYW1BQ6NUM6 668 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 BARHL2Q9NY43 387 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 LTBP2Q14767 1821 aa30.35■■■□□ 2.45
CDK9-202ENST00000421939 CDK7P50613 346 aa30.34■■■□□ 2.45
CDK9-202ENST00000421939 PURAQ00577 322 aaKnown RBP30.34■■■□□ 2.45
CDK9-202ENST00000421939 KCNV1Q6PIU1 500 aa30.34■■■□□ 2.45
CDK9-202ENST00000421939 DCDC2CA8MYV0 355 aa30.33■■■□□ 2.45
CDK9-202ENST00000421939 STAM2O75886 525 aa30.33■■■□□ 2.45
CDK9-202ENST00000421939 MYL3P08590 195 aa30.33■■■□□ 2.45
CDK9-202ENST00000421939 MRPS9P82933 396 aaKnown RBP30.33■■■□□ 2.45
CDK9-202ENST00000421939 PFKFB3Q16875 520 aaPredicted RBP30.33■■■□□ 2.45
CDK9-202ENST00000421939 SH3RF1Q7Z6J0 888 aa30.33■■■□□ 2.45
CDK9-202ENST00000421939 TEX2Q8IWB9 1127 aa30.33■■■□□ 2.45
CDK9-202ENST00000421939 ZFP91Q96JP5 570 aaPredicted RBP30.33■■■□□ 2.45
CDK9-202ENST00000421939 LBHD1Q9BQE6 289 aaPredicted RBP30.33■■■□□ 2.45
CDK9-202ENST00000421939 NCOA5Q9HCD5 579 aaKnown RBP30.33■■■□□ 2.45
CDK9-202ENST00000421939 SCG2P13521 617 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 CCT2P78371 535 aaKnown RBP30.32■■■□□ 2.44
CDK9-202ENST00000421939 MDM2Q00987 491 aaPredicted RBP30.32■■■□□ 2.44
CDK9-202ENST00000421939 ITGA7Q13683 1181 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 NTRK3Q16288 839 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 GNPTABQ3T906 1256 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 PCNX4Q63HM2 1172 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 XRRA1Q6P2D8 792 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 SLC43A3Q8NBI5 491 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 AFG1LQ8WV93 481 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 RIC8AQ9NPQ8 531 aa30.32■■■□□ 2.44
CDK9-202ENST00000421939 GRIN2DO15399 1336 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 TRIM43BA6NCK2 446 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 SPDYE3A6NKU9 549 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 KPNA6O60684 536 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 SEC24BO95487 1268 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 BMP8BP34820 402 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 ADCY7P51828 1080 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 PHKBQ93100 1093 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 EMID1Q96A84 441 aaPredicted RBP30.31■■■□□ 2.44
CDK9-202ENST00000421939 TRIM43Q96BQ3 446 aaPredicted RBP30.31■■■□□ 2.44
CDK9-202ENST00000421939 IL17RAQ96F46 866 aa30.31■■■□□ 2.44
CDK9-202ENST00000421939 ZNF274Q96GC6 653 aaPredicted RBP30.31■■■□□ 2.44
CDK9-202ENST00000421939 INPP4AQ96PE3 977 aaPredicted RBP30.31■■■□□ 2.44
CDK9-202ENST00000421939 LARP6Q9BRS8 491 aaKnown RBP30.31■■■□□ 2.44
CDK9-202ENST00000421939 MTG1Q9BT17 334 aaPredicted RBP30.31■■■□□ 2.44
CDK9-202ENST00000421939 PRPF3O43395 683 aaKnown RBP30.3■■■□□ 2.44
CDK9-202ENST00000421939 TGFB3P10600 412 aa30.3■■■□□ 2.44
CDK9-202ENST00000421939 IFNAR1P17181 557 aa30.3■■■□□ 2.44
CDK9-202ENST00000421939 PSMC6P62333 389 aa30.3■■■□□ 2.44
CDK9-202ENST00000421939 AKAP17AQ02040 695 aaKnown RBP30.3■■■□□ 2.44
CDK9-202ENST00000421939 FAAP100Q0VG06 881 aa30.3■■■□□ 2.44
CDK9-202ENST00000421939 FAM126BQ8IXS8 530 aa30.3■■■□□ 2.44
CDK9-202ENST00000421939 RNF26Q9BY78 433 aaPredicted RBP30.3■■■□□ 2.44
CDK9-202ENST00000421939 SEZ6LQ9BYH1 1024 aa30.3■■■□□ 2.44
CDK9-202ENST00000421939 A0A1W2PPC1 479 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 KIAA0355O15063 1070 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 MMP3P08254 477 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 UBA1P22314 1058 aaKnown RBP30.29■■■□□ 2.44
CDK9-202ENST00000421939 LAMC2Q13753 1193 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 DHX37Q8IY37 1157 aaKnown RBP30.29■■■□□ 2.44
CDK9-202ENST00000421939 GLT8D2Q9H1C3 349 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 TMEM39AQ9NV64 488 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 PCDHA6Q9UN73 950 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 PCDHA8Q9Y5H6 950 aa30.29■■■□□ 2.44
CDK9-202ENST00000421939 SCN10AQ9Y5Y9 1956 aa30.28■■■□□ 2.44
CDK9-202ENST00000421939 SMCO2A6NFE2 343 aa30.28■■■□□ 2.44
CDK9-202ENST00000421939 PKN1Q16512 942 aa30.28■■■□□ 2.44
CDK9-202ENST00000421939 SLC26A6Q9BXS9 759 aa30.28■■■□□ 2.44
CDK9-202ENST00000421939 UBE2OQ9C0C9 1292 aaKnown RBP30.28■■■□□ 2.44
CDK9-202ENST00000421939 EHMT1Q9H9B1 1298 aa30.28■■■□□ 2.44
CDK9-202ENST00000421939 RTEL1Q9NZ71 1219 aa30.28■■■□□ 2.44
CDK9-202ENST00000421939 TLR3O15455 904 aaKnown RBP30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms