RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 DNAH12Q6ZR08 3092 aa24.63■■□□□ 1.53
FNDC3B-204ENST00000421757 A0A0U1RQG5 324 aaPredicted RBP24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 hCG_1984214I3L0E3 225 aa24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 CABYRO75952 493 aa24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 EVCP57679 992 aa24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 AKAP17AQ02040 695 aaKnown RBP24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 TLE2Q04725 743 aa24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 UBE2SQ16763 222 aa24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 CCDC62Q6P9F0 684 aa24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 ZNF713Q8N859 430 aaPredicted RBP24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 NID2Q14112 1375 aa24.62■■□□□ 1.53
FNDC3B-204ENST00000421757 GH1P01241 217 aa24.61■■□□□ 1.53
FNDC3B-204ENST00000421757 MYL3P08590 195 aa24.61■■□□□ 1.53
FNDC3B-204ENST00000421757 NCOA5Q9HCD5 579 aaKnown RBP24.61■■□□□ 1.53
FNDC3B-204ENST00000421757 POLR3EQ9NVU0 708 aa24.61■■□□□ 1.53
FNDC3B-204ENST00000421757 SPDYE3A6NKU9 549 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 STXBP3O00186 592 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 PPFIA3O75145 1194 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 STK3Q13188 491 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 PFKFB3Q16875 520 aaPredicted RBP24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 PPP1R18Q6NYC8 613 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 PHKBQ93100 1093 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 ZNF274Q96GC6 653 aaPredicted RBP24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 BARHL2Q9NY43 387 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 PCDH10Q9P2E7 1040 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 RBM27Q9P2N5 1060 aaKnown RBP24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 DDX41Q9UJV9 622 aaKnown RBP24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 FRMPD4Q14CM0 1322 aa24.6■■□□□ 1.53
FNDC3B-204ENST00000421757 DCDC2CA8MYV0 355 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 ARVCFO00192 962 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 RGS20O76081 388 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 SCG2P13521 617 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 ADCY7P51828 1080 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 TYW1BQ6NUM6 668 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 KCNV1Q6PIU1 500 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 SLC26A6Q9BXS9 759 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 RTEL1Q9NZ71 1219 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 CEP290O15078 2479 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 MROH7Q68CQ1 1323 aa24.59■■□□□ 1.53
FNDC3B-204ENST00000421757 SMCO2A6NFE2 343 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 CPLX1O14810 134 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 PRPF3O43395 683 aaKnown RBP24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 STAM2O75886 525 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 CLTBP09497 229 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 MAGEA10P43363 369 aaPredicted RBP24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 MRPS9P82933 396 aaKnown RBP24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 GNPTABQ3T906 1256 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 DHX37Q8IY37 1157 aaKnown RBP24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 AFG1LQ8WV93 481 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 LBHD1Q9BQE6 289 aaPredicted RBP24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 RIC8AQ9NPQ8 531 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 PDLIM7Q9NR12 457 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 PCDHA6Q9UN73 950 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 PCDHA8Q9Y5H6 950 aa24.58■■□□□ 1.53
FNDC3B-204ENST00000421757 A6NJR5 290 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 IFNAR1P17181 557 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 PSMC6P62333 389 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 MDM2Q00987 491 aaPredicted RBP24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 ARHGAP1Q07960 439 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 ITGA7Q13683 1181 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 NTRK3Q16288 839 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 PCNX4Q63HM2 1172 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 ANKRD33Q7Z3H0 272 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 TOX2Q96NM4 488 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 EHMT1Q9H9B1 1298 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 TMEM39AQ9NV64 488 aa24.57■■□□□ 1.52
FNDC3B-204ENST00000421757 SORBS3O60504 671 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 KPNA6O60684 536 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 CDK7P50613 346 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 PURAQ00577 322 aaKnown RBP24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 LAMC2Q13753 1193 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 ANKRD1Q15327 319 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 C8orf34Q49A92 452 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 XRRA1Q6P2D8 792 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 CPLX2Q6PUV4 134 aaKnown RBP24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 SH3RF1Q7Z6J0 888 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 CCDC12Q8WUD4 166 aaPredicted RBP24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 MTG1Q9BT17 334 aaPredicted RBP24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 RNF26Q9BY78 433 aaPredicted RBP24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 GLT8D2Q9H1C3 349 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 KIAA1217Q5T5P2 1943 aa24.56■■□□□ 1.52
FNDC3B-204ENST00000421757 TLR3O15455 904 aaKnown RBP24.55■■□□□ 1.52
FNDC3B-204ENST00000421757 MMP3P08254 477 aa24.55■■□□□ 1.52
FNDC3B-204ENST00000421757 TGFB3P10600 412 aa24.55■■□□□ 1.52
FNDC3B-204ENST00000421757 HABP4Q5JVS0 413 aaKnown RBP24.55■■□□□ 1.52
FNDC3B-204ENST00000421757 TRIM22Q8IYM9 498 aa24.55■■□□□ 1.52
FNDC3B-204ENST00000421757 INPP4AQ96PE3 977 aaPredicted RBP24.55■■□□□ 1.52
FNDC3B-204ENST00000421757 GDF15Q99988 308 aa24.55■■□□□ 1.52
FNDC3B-204ENST00000421757 TRIM43BA6NCK2 446 aa24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 GGPS1O95749 300 aa24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 CHMP4BP1P59074 171 aa24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 SSRP1Q08945 709 aaKnown RBP24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 FAAP100Q0VG06 881 aa24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 PKN1Q16512 942 aa24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 NLRX1Q86UT6 975 aa24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 TRIM43Q96BQ3 446 aaPredicted RBP24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 ALDH8A1Q9H2A2 487 aaPredicted RBP24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 SLKQ9H2G2 1235 aaPredicted RBP24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 MLXIPQ9HAP2 919 aa24.54■■□□□ 1.52
FNDC3B-204ENST00000421757 FIBPO43427 364 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms