RNA–Protein interactions for RNA: ENST00000421058.1

PUDPP1-201, Transcript of pseudouridine 5'-phosphatase pseudogene 1, humanhuman

BASIC

Gene PUDPP1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP1-201ENST00000421058 WDR11Q9BZH6 1224 aa9.5□□□□□ -0.89
PUDPP1-201ENST00000421058 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.5□□□□□ -0.89
PUDPP1-201ENST00000421058 Q9Y3F1 56 aa9.5□□□□□ -0.89
PUDPP1-201ENST00000421058 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 CCDC85CA6NKD9 419 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 OPLAHO14841 1288 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 FIBPO43427 364 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 DUSP11O75319 330 aaKnown RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 SNAI1O95863 264 aaPredicted RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 CYP3A4P08684 503 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 GCFC2P16383 781 aaKnown RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 SREBF1P36956 1147 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 CLK2P49760 499 aaKnown RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 ARHGAP4P98171 946 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 GUCY1B3Q02153 619 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 MTMR1Q13613 665 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 CCDC144BQ3MJ40 725 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 CEP55Q53EZ4 464 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 TYW1BQ6NUM6 668 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 PIK3AP1Q6ZUJ8 805 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 NEK8Q86SG6 692 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 PCSK9Q8NBP7 692 aaKnown RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 TBCKQ8TEA7 893 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 TNPO1Q92973 898 aaKnown RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 GPRASP2Q96D09 838 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 ZNF333Q96JL9 665 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 AIFM3Q96NN9 605 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 SDF4Q9BRK5 362 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 MLXIPQ9HAP2 919 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 RTEL1Q9NZ71 1219 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 FLRT1Q9NZU1 646 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 COL20A1Q9P218 1284 aa9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 DDX20Q9UHI6 824 aaKnown RBP9.49□□□□□ -0.89
PUDPP1-201ENST00000421058 BTBD18B2RXH4 712 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 KBTBD13C9JR72 458 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 NOP56O00567 594 aaKnown RBP9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 CCNT1O60563 726 aaKnown RBP9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 KPNA6O60684 536 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 GH1P01241 217 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 GJB1P08034 283 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 ZNF865P0CJ78 1059 aaPredicted RBP9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 CYBAP13498 195 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 EDNRBP24530 442 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 TRAPPC10P48553 1259 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 CPT1AP50416 773 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 CAP1Q01518 475 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 LAMC2Q13753 1193 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 LETM2Q2VYF4 491 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 DUSP28Q4G0W2 176 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 PRAMEF19Q5SWL8 479 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 MAP3K21Q5TCX8 1036 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 NIPA1Q7RTP0 329 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 FBXO16Q8IX29 292 aaPredicted RBP9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 DHX37Q8IY37 1157 aaKnown RBP9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 ABHD8Q96I13 439 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 DEFB118Q96PH6 123 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 SENP7Q9BQF6 1050 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 MXRA8Q9BRK3 442 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 UNC93B1Q9H1C4 597 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 ZSCAN16Q9H4T2 348 aaPredicted RBP9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 JADE2Q9NQC1 790 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 TBC1D22BQ9NU19 505 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 TMEM260Q9NX78 707 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 ATP6V1DQ9Y5K8 247 aa9.48□□□□□ -0.89
PUDPP1-201ENST00000421058 PLXNA1Q9UIW2 1896 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 RBM47A0AV96 593 aaKnown RBP9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 DYNC1LI2O43237 492 aaPredicted RBP9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 STX6O43752 255 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 SGPL1O95470 568 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 ICAM3P32942 547 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 ST3GAL1Q11201 340 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 ORC2Q13416 577 aaPredicted RBP9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 RILPL1Q5EBL4 403 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 MOXD1Q6UVY6 613 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 BRAPQ7Z569 592 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 PLA2G4DQ86XP0 818 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 NOSTRINQ8IVI9 506 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 SLFN12Q8IYM2 578 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 OR6J1Q8NGC5 347 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 RASGRP4Q8TDF6 673 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 VTI1AQ96AJ9 217 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 PGBD1Q96JS3 809 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 XPNPEP3Q9NQH7 507 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 DDX25Q9UHL0 483 aaKnown RBP9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 CEP131Q9UPN4 1083 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 FRMPD4Q14CM0 1322 aa9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 RBBP6Q7Z6E9 1792 aaKnown RBP9.47□□□□□ -0.89
PUDPP1-201ENST00000421058 DOCK3Q8IZD9 2030 aa9.46□□□□□ -0.89
PUDPP1-201ENST00000421058 SPATA31C2B4DYI2 1134 aa9.46□□□□□ -0.9
PUDPP1-201ENST00000421058 BMP15O95972 392 aa9.46□□□□□ -0.9
PUDPP1-201ENST00000421058 C6orf222P0C671 652 aaPredicted RBP9.46□□□□□ -0.9
PUDPP1-201ENST00000421058 ATP2B1P20020 1258 aa9.46□□□□□ -0.9
PUDPP1-201ENST00000421058 SYT1P21579 422 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms