RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 SEPT14Q6ZU15 432 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 RNF180Q86T96 592 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 SCFD2Q8WU76 684 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 GTF3C6Q969F1 213 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 FERMT2Q96AC1 680 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 PGBD1Q96JS3 809 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 TBC1D32Q96NH3 1257 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 AIFM3Q96NN9 605 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 SENP6Q9GZR1 1112 aaPredicted RBP19.02■□□□□ 0.64
SEC22C-206ENST00000420163 TMEM260Q9NX78 707 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 VPS54Q9P1Q0 977 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 PHF24Q9UPV7 400 aa19.02■□□□□ 0.64
SEC22C-206ENST00000420163 DYNC1LI2O43237 492 aaPredicted RBP19.01■□□□□ 0.63
SEC22C-206ENST00000420163 CST5P28325 142 aaPredicted RBP19.01■□□□□ 0.63
SEC22C-206ENST00000420163 CCND2P30279 289 aa19.01■□□□□ 0.63
SEC22C-206ENST00000420163 NKX3-2P78367 333 aa19.01■□□□□ 0.63
SEC22C-206ENST00000420163 SSRP1Q08945 709 aaKnown RBP19.01■□□□□ 0.63
SEC22C-206ENST00000420163 TRIM22Q8IYM9 498 aa19.01■□□□□ 0.63
SEC22C-206ENST00000420163 UPF2Q9HAU5 1272 aaKnown RBP19.01■□□□□ 0.63
SEC22C-206ENST00000420163 PCDHA6Q9UN73 950 aa19.01■□□□□ 0.63
SEC22C-206ENST00000420163 PCDHA8Q9Y5H6 950 aa19.01■□□□□ 0.63
SEC22C-206ENST00000420163 ESYT2A0FGR8 921 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 TXNP10599 105 aaKnown RBP19■□□□□ 0.63
SEC22C-206ENST00000420163 CLK2P49760 499 aaKnown RBP19■□□□□ 0.63
SEC22C-206ENST00000420163 ACLYP53396 1101 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 TTLL4Q14679 1199 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 KCNA10Q16322 511 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 LRRC26Q2I0M4 334 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 GNASQ5JWF2 1037 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 CPLX2Q6PUV4 134 aaKnown RBP19■□□□□ 0.63
SEC22C-206ENST00000420163 HTATIP2Q9BUP3 242 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 ZMYND12Q9H0C1 365 aa19■□□□□ 0.63
SEC22C-206ENST00000420163 SPDYE3A6NKU9 549 aa18.99■□□□□ 0.63
SEC22C-206ENST00000420163 DEXIO95424 95 aa18.99■□□□□ 0.63
SEC22C-206ENST00000420163 ATN1P54259 1190 aaPredicted RBP18.99■□□□□ 0.63
SEC22C-206ENST00000420163 LY6KQ17RY6 165 aa18.99■□□□□ 0.63
SEC22C-206ENST00000420163 PCNX4Q63HM2 1172 aa18.99■□□□□ 0.63
SEC22C-206ENST00000420163 AP5M1Q9H0R1 490 aa18.99■□□□□ 0.63
SEC22C-206ENST00000420163 SPC25Q9HBM1 224 aa18.99■□□□□ 0.63
SEC22C-206ENST00000420163 Q9Y3F1 56 aa18.99■□□□□ 0.63
SEC22C-206ENST00000420163 A0A1W2PQ45 241 aaPredicted RBP18.98■□□□□ 0.63
SEC22C-206ENST00000420163 A0A1W2PQY0 241 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 CDKL5O76039 1030 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 ASGR1P07306 291 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 ARHGAP1Q07960 439 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 SEMA3FQ13275 785 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 RABEP1Q15276 862 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 FSCN1Q16658 493 aaKnown RBP18.98■□□□□ 0.63
SEC22C-206ENST00000420163 JAKMIP3Q5VZ66 844 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 OR6J1Q8NGC5 347 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 INPP4AQ96PE3 977 aaPredicted RBP18.98■□□□□ 0.63
SEC22C-206ENST00000420163 TSEN34Q9BSV6 310 aaKnown RBP18.98■□□□□ 0.63
SEC22C-206ENST00000420163 ANO3Q9BYT9 981 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 RTEL1Q9NZ71 1219 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 DDX41Q9UJV9 622 aaKnown RBP18.98■□□□□ 0.63
SEC22C-206ENST00000420163 LIMCH1Q9UPQ0 1083 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 MRVI1Q9Y6F6 885 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 STK36Q9NRP7 1315 aa18.98■□□□□ 0.63
SEC22C-206ENST00000420163 SCN10AQ9Y5Y9 1956 aa18.97■□□□□ 0.63
SEC22C-206ENST00000420163 NKRFO15226 690 aaKnown RBP eCLIP18.97■□□□□ 0.63
SEC22C-206ENST00000420163 JAK2O60674 1132 aa18.97■□□□□ 0.63
SEC22C-206ENST00000420163 FDPSP14324 419 aaKnown RBP18.97■□□□□ 0.63
SEC22C-206ENST00000420163 NSUN7Q8NE18 718 aaKnown RBP18.97■□□□□ 0.63
SEC22C-206ENST00000420163 CCDC148Q8NFR7 591 aa18.97■□□□□ 0.63
SEC22C-206ENST00000420163 RASGRP4Q8TDF6 673 aa18.97■□□□□ 0.63
SEC22C-206ENST00000420163 CCDC12Q8WUD4 166 aaPredicted RBP18.97■□□□□ 0.63
SEC22C-206ENST00000420163 DPF3Q92784 378 aa18.97■□□□□ 0.63
SEC22C-206ENST00000420163 C6orf50Q9HD87 102 aa18.97■□□□□ 0.63
SEC22C-206ENST00000420163 MOXD2PA6NHM9 499 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 CD2BP2O95400 341 aaKnown RBP18.96■□□□□ 0.63
SEC22C-206ENST00000420163 SP2Q02086 613 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 CXCL17Q6UXB2 119 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 TEX2Q8IWB9 1127 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 CCDC83Q8IWF9 413 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 PCSK9Q8NBP7 692 aaKnown RBP18.96■□□□□ 0.63
SEC22C-206ENST00000420163 GLT8D2Q9H1C3 349 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 BCAS3Q9H6U6 928 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 SH3GLB2Q9NR46 395 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 GJB4Q9NTQ9 266 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 PCDH10Q9P2E7 1040 aa18.96■□□□□ 0.63
SEC22C-206ENST00000420163 SORBS3O60504 671 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 GH1P01241 217 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 ITGB5P18084 799 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 UBA1P22314 1058 aaKnown RBP18.95■□□□□ 0.62
SEC22C-206ENST00000420163 AP3B2Q13367 1082 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 NPY5RQ15761 445 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 XRRA1Q6P2D8 792 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 SLC39A5Q6ZMH5 540 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 C7orf61Q8IZ16 206 aa18.95■□□□□ 0.62
SEC22C-206ENST00000420163 REXO1Q8N1G1 1221 aaKnown RBP18.95■□□□□ 0.62
SEC22C-206ENST00000420163 ORC3Q9UBD5 711 aaPredicted RBP18.95■□□□□ 0.62
SEC22C-206ENST00000420163 EVI5O60447 810 aa18.94■□□□□ 0.62
SEC22C-206ENST00000420163 STAM2O75886 525 aa18.94■□□□□ 0.62
SEC22C-206ENST00000420163 FOSP01100 380 aaPredicted RBP18.94■□□□□ 0.62
SEC22C-206ENST00000420163 GNA11P29992 359 aa18.94■□□□□ 0.62
SEC22C-206ENST00000420163 ICAM3P32942 547 aa18.94■□□□□ 0.62
SEC22C-206ENST00000420163 SREBF1P36956 1147 aa18.94■□□□□ 0.62
SEC22C-206ENST00000420163 RTP1P59025 263 aa18.94■□□□□ 0.62
SEC22C-206ENST00000420163 NLRP5P59047 1200 aa18.94■□□□□ 0.62
SEC22C-206ENST00000420163 SNX17Q15036 470 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms