RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 REC8O95072 547 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 MYCLP12524 364 aaPredicted RBP9.84□□□□□ -0.83
GACAT1-201ENST00000419650 RAG1P15918 1043 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 SMARCA1P28370 1054 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 CPT1AP50416 773 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 CDK7P50613 346 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 ITGA7Q13683 1181 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 LY6KQ17RY6 165 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 ERICH6BQ5W0A0 696 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 CCDC62Q6P9F0 684 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 SYNE3Q6ZMZ3 975 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 FAM126BQ8IXS8 530 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 SAMD3Q8N6K7 520 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 KCNB2Q92953 911 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 LRCH3Q96II8 777 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 ZFP91Q96JP5 570 aaPredicted RBP9.84□□□□□ -0.83
GACAT1-201ENST00000419650 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 MAP3K20Q9NYL2 800 aaKnown RBP9.84□□□□□ -0.83
GACAT1-201ENST00000419650 NAP1L2Q9ULW6 460 aaPredicted RBP9.84□□□□□ -0.83
GACAT1-201ENST00000419650 SNX14Q9Y5W7 946 aa9.84□□□□□ -0.83
GACAT1-201ENST00000419650 GRIN2DO15399 1336 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 CNTNAP5Q8WYK1 1306 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 RANBP2P49792 3224 aaKnown RBP9.83□□□□□ -0.84
GACAT1-201ENST00000419650 GOLGA8AA7E2F4 631 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 GOLGA8BA8MQT2 603 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 TLR3O15455 904 aaKnown RBP9.83□□□□□ -0.84
GACAT1-201ENST00000419650 ZBTB43O43298 467 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 EIF3JO75822 258 aaKnown RBP9.83□□□□□ -0.84
GACAT1-201ENST00000419650 RGS20O76081 388 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 GH1P01241 217 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 HMGB1P09429 215 aaKnown RBP9.83□□□□□ -0.84
GACAT1-201ENST00000419650 FGD1P98174 961 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 PURAQ00577 322 aaKnown RBP9.83□□□□□ -0.84
GACAT1-201ENST00000419650 ARHGAP1Q07960 439 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 RTN1Q16799 776 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 BRDTQ58F21 947 aaPredicted RBP9.83□□□□□ -0.84
GACAT1-201ENST00000419650 USP17L6PQ6QN14 398 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 BLOC1S2Q6QNY1 142 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 SLC43A3Q8NBI5 491 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 SMARCC2Q8TAQ2 1214 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 PPP1R13LQ8WUF5 828 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 GPKOWQ92917 476 aaPredicted RBP eCLIP9.83□□□□□ -0.84
GACAT1-201ENST00000419650 CUL5Q93034 780 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 TBX21Q9UL17 535 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 MRVI1Q9Y6F6 885 aa9.83□□□□□ -0.84
GACAT1-201ENST00000419650 A6NJR5 290 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 SORBS3O60504 671 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 B4GALT4O60513 344 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 CD4P01730 458 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 CASTP20810 708 aaKnown RBP9.82□□□□□ -0.84
GACAT1-201ENST00000419650 CCND2P30279 289 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 FPGSQ05932 587 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 APOBRQ0VD83 1088 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 SHHQ15465 462 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 LRIT3Q3SXY7 679 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 C9orf50Q5SZB4 431 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 Q6ZUG5 572 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 HEATR3Q7Z4Q2 680 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 VSIG10LQ86VR7 867 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 AFG1LQ8WV93 481 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 BRF1Q92994 677 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 MTG1Q9BT17 334 aaPredicted RBP9.82□□□□□ -0.84
GACAT1-201ENST00000419650 TRPV6Q9H1D0 765 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 RBM28Q9NW13 759 aaKnown RBP9.82□□□□□ -0.84
GACAT1-201ENST00000419650 DDX41Q9UJV9 622 aaKnown RBP9.82□□□□□ -0.84
GACAT1-201ENST00000419650 FRMPD4Q14CM0 1322 aa9.82□□□□□ -0.84
GACAT1-201ENST00000419650 TANC1Q9C0D5 1861 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 PIK3CDO00329 1044 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 MEIS2O14770 477 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 TIMP1P01033 207 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 MMP3P08254 477 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 UBA1P22314 1058 aaKnown RBP9.81□□□□□ -0.84
GACAT1-201ENST00000419650 RPS6KB1P23443 525 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 CDC27P30260 824 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 EPHB4P54760 987 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 FUT2Q10981 343 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 UBE2SQ16763 222 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 NBPF20Q3BBV1 942 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 FAM47CQ5HY64 1035 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 WWC2Q6AWC2 1192 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 SEZ6LQ9BYH1 1024 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 ALDH8A1Q9H2A2 487 aaPredicted RBP9.81□□□□□ -0.84
GACAT1-201ENST00000419650 TRMT13Q9NUP7 481 aaKnown RBP9.81□□□□□ -0.84
GACAT1-201ENST00000419650 UMODL1Q5DID0 1318 aa9.81□□□□□ -0.84
GACAT1-201ENST00000419650 SCN5AQ14524 2016 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 KPNA6O60684 536 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 GGPS1O95749 300 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 ZNF286BP0CG31 522 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 PSMA5P28066 241 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 CYP2C18P33260 490 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.84
GACAT1-201ENST00000419650 RCAN1P53805 252 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 MRPS9P82933 396 aaKnown RBP9.8□□□□□ -0.84
GACAT1-201ENST00000419650 MFSD5Q6N075 450 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 DHX37Q8IY37 1157 aaKnown RBP9.8□□□□□ -0.84
GACAT1-201ENST00000419650 USP26Q9BXU7 913 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 HIPK3Q9H422 1215 aa9.8□□□□□ -0.84
GACAT1-201ENST00000419650 PSTPIP2Q9H939 334 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms