RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 MYH8P13535 1937 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 LGR5O75473 907 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 FSBPO95073 299 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 ARID4AP29374 1257 aaPredicted RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 SNX1Q13596 522 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 NT5DC1Q5TFE4 455 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 AENQ8WTP8 325 aaKnown RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 NUP58Q9BVL2 599 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 DISC1Q9NRI5 854 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 FAM107AO95990 144 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 PCCAP05165 728 aaPredicted RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 ZKSCAN8Q15776 578 aaPredicted RBP12.86□□□□□ -0.35
DDR1-232ENST00000418800 MTRQ99707 1265 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 ATP8A1Q9Y2Q0 1164 aa12.86□□□□□ -0.35
DDR1-232ENST00000418800 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 A6NNZ2 444 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 TMEM110-MUSTN1A8MSY1 372 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 SHOX2O60902 331 aaPredicted RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 PDHA1P08559 390 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 KRT13P13646 458 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 EEF1GP26641 437 aaKnown RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 KIF5BP33176 963 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 TFAP4Q01664 338 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 KLHL30Q0D2K2 578 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 TUBB8Q3ZCM7 444 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 DAAM2Q86T65 1068 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 SEC16BQ96JE7 1060 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 NOD2Q9HC29 1040 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 ADAMTS3O15072 1205 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 CAVIN4Q5BKX8 364 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 ZNF444Q8N0Y2 327 aaPredicted RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 TSG101Q99816 390 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 LSM14BQ9BX40 385 aaKnown RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 NDST4Q9H3R1 872 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 LMTK3Q96Q04 1460 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 SEMA3EO15041 775 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 NKRFO15226 690 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDR1-232ENST00000418800 SMIM24O75264 130 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 GNAT2P19087 354 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 PBX1P40424 430 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 SCTRP47872 440 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 TNNC1P63316 161 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 AMPD3Q01432 767 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 RBBP5Q15291 538 aaKnown RBP12.85□□□□□ -0.35
DDR1-232ENST00000418800 RPS6KA1Q15418 735 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 QPCTQ16769 361 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 SLC9C1Q4G0N8 1177 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 ADSSL1Q8N142 457 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
DDR1-232ENST00000418800 DNM1LO00429 736 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 SESN3P58005 492 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 THEMIS2Q5TEJ8 643 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 PAPD7Q5XG87 772 aaKnown RBP12.84□□□□□ -0.35
DDR1-232ENST00000418800 HAUS3Q68CZ6 603 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 FNBP4Q8N3X1 1017 aaPredicted RBP12.84□□□□□ -0.35
DDR1-232ENST00000418800 EPHB6O15197 1021 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 ABCB4P21439 1286 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 TNNI2P48788 182 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 PSMD2Q13200 908 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 CRYMQ14894 314 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 CREG2Q8IUH2 290 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 EGFL6Q8IUX8 553 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 SH3GL2Q99962 352 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 ACTR5Q9H9F9 607 aaPredicted RBP12.84□□□□□ -0.35
DDR1-232ENST00000418800 EME2A4GXA9 379 aaPredicted RBP12.84□□□□□ -0.35
DDR1-232ENST00000418800 TSPY3P0CV98 308 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 TSPY8P0CW00 308 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 CALML3P27482 149 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 FNTAP49354 379 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 ATP2C1P98194 919 aaPredicted RBP12.84□□□□□ -0.35
DDR1-232ENST00000418800 TXNRD1Q16881 649 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 SPRED3Q2MJR0 410 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 TMED8Q6PL24 325 aaPredicted RBP12.84□□□□□ -0.35
DDR1-232ENST00000418800 SV2BQ7L1I2 683 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 NLRP10Q86W26 655 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 IRF2BP1Q8IU81 584 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 CCDC197Q8NCU1 140 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 GJA10Q969M2 543 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 DYNLL2Q96FJ2 89 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
DDR1-232ENST00000418800 FAM237AA0A1B0GTK4 181 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 KRIT1O00522 736 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 ANP32DO95626 131 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 PKN1Q16512 942 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 DZIP1Q86YF9 867 aaKnown RBP12.83□□□□□ -0.36
DDR1-232ENST00000418800 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
DDR1-232ENST00000418800 PYM1Q9BRP8 204 aaKnown RBP12.83□□□□□ -0.36
DDR1-232ENST00000418800 ZCWPW1Q9H0M4 648 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms