RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 PDGFCQ9NRA1 345 aa22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 SH2B1Q9NRF2 756 aaPredicted RBP22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 GNEQ9Y223 722 aaKnown RBP22.73■■□□□ 1.23
RPUSD3-202ENST00000418713 DYNC1LI2O43237 492 aaPredicted RBP22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 PGK1P00558 417 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 GNASQ5JWF2 1037 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 PCNX4Q63HM2 1172 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 TLK2Q86UE8 772 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 NLRX1Q86UT6 975 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 CDHR1Q96JP9 859 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 SEZ6LQ9BYH1 1024 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 SENP6Q9GZR1 1112 aaPredicted RBP22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 NR2E3Q9Y5X4 410 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 SYNRGQ9UMZ2 1314 aa22.72■■□□□ 1.23
RPUSD3-202ENST00000418713 LCTP09848 1927 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 KPNA6O60684 536 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 ADAMTS4O75173 837 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 CABYRO75952 493 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 COL6A1P12109 1028 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 MCM2P49736 904 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 CPT1AP50416 773 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 PKN1Q16512 942 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 KLHDC9Q8NEP7 349 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 PCDHA6Q9UN73 950 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 PHF24Q9UPV7 400 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 PCDHA8Q9Y5H6 950 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 MRVI1Q9Y6F6 885 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 FRMPD4Q14CM0 1322 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 STK36Q9NRP7 1315 aa22.71■■□□□ 1.23
RPUSD3-202ENST00000418713 MAFGO15525 162 aa22.7■■□□□ 1.22
RPUSD3-202ENST00000418713 MNX1P50219 401 aaPredicted RBP22.7■■□□□ 1.22
RPUSD3-202ENST00000418713 NLRP5P59047 1200 aa22.7■■□□□ 1.22
RPUSD3-202ENST00000418713 ME3Q16798 604 aa22.7■■□□□ 1.22
RPUSD3-202ENST00000418713 GTF3C6Q969F1 213 aa22.7■■□□□ 1.22
RPUSD3-202ENST00000418713 GLT1D1Q96MS3 346 aa22.7■■□□□ 1.22
RPUSD3-202ENST00000418713 TBC1D32Q96NH3 1257 aa22.7■■□□□ 1.22
RPUSD3-202ENST00000418713 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 GH1P01241 217 aa22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 FSCN1Q16658 493 aaKnown RBP22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 REXO1Q8N1G1 1221 aaKnown RBP22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 GIMAP8Q8ND71 665 aaPredicted RBP22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 OR6J1Q8NGC5 347 aa22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 DIS3LQ8TF46 1054 aaKnown RBP22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 KIF2CQ99661 725 aa22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 POLR3EQ9NVU0 708 aa22.69■■□□□ 1.22
RPUSD3-202ENST00000418713 EVI5O60447 810 aa22.68■■□□□ 1.22
RPUSD3-202ENST00000418713 LAMC2Q13753 1193 aa22.68■■□□□ 1.22
RPUSD3-202ENST00000418713 KCNA10Q16322 511 aa22.68■■□□□ 1.22
RPUSD3-202ENST00000418713 UBE2SQ16763 222 aa22.68■■□□□ 1.22
RPUSD3-202ENST00000418713 LLPHQ9BRT6 129 aaKnown RBP22.68■■□□□ 1.22
RPUSD3-202ENST00000418713 DDX41Q9UJV9 622 aaKnown RBP22.68■■□□□ 1.22
RPUSD3-202ENST00000418713 ELP1O95163 1332 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 FRMPD3Q5JV73 1810 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 ICAM3P32942 547 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 ACLYP53396 1101 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 NEDD9Q14511 834 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 TYW1BQ6NUM6 668 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 CCDC62Q6P9F0 684 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 VTI1AQ96AJ9 217 aa22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 ORC3Q9UBD5 711 aaPredicted RBP22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 DDX49Q9Y6V7 483 aaKnown RBP22.67■■□□□ 1.22
RPUSD3-202ENST00000418713 FIBPO43427 364 aa22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 C1orf53Q5VUE5 145 aa22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 DHX37Q8IY37 1157 aaKnown RBP22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 LENG1Q96BZ8 264 aaPredicted RBP22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 GPRASP2Q96D09 838 aa22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 INPP4AQ96PE3 977 aaPredicted RBP22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 STARD7Q9NQZ5 370 aa22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 VPS54Q9P1Q0 977 aa22.66■■□□□ 1.22
RPUSD3-202ENST00000418713 ADCY6O43306 1168 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 ASGR1P07306 291 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 ZNF76P36508 570 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 CLK2P49760 499 aaKnown RBP22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 CCSAPQ6IQ19 270 aaPredicted RBP22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 SLC39A5Q6ZMH5 540 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 NECAB1Q8N987 351 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 EMID1Q96A84 441 aaPredicted RBP22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 SENP7Q9BQF6 1050 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 ANO3Q9BYT9 981 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 BRMS1Q9HCU9 246 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 PCDHA4Q9UN74 947 aa22.65■■□□□ 1.22
RPUSD3-202ENST00000418713 MROH7Q68CQ1 1323 aa22.64■■□□□ 1.22
RPUSD3-202ENST00000418713 A6NJR5 290 aa22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 SPATA31C2B4DYI2 1134 aa22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 MRPS9P82933 396 aaKnown RBP22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 TRIM29Q14134 588 aa22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 LY6KQ17RY6 165 aa22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 MLXIPQ9HAP2 919 aa22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 RTEL1Q9NZ71 1219 aa22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 KIAA1217Q5T5P2 1943 aa22.64■■□□□ 1.21
RPUSD3-202ENST00000418713 A0A1W2PQ45 241 aaPredicted RBP22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 A0A1W2PQY0 241 aa22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 PPFIA3O75145 1194 aa22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 SREBF1P36956 1147 aa22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 JAKMIP3Q5VZ66 844 aa22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 IL31RAQ8NI17 732 aa22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 FERMT2Q96AC1 680 aa22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 KIF3AQ9Y496 699 aa22.63■■□□□ 1.21
RPUSD3-202ENST00000418713 BEX3Q00994 111 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms