RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CDR2Q01850 454 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 KCTD6Q8NC69 237 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 RNF217Q8TC41 542 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 IFT122Q9HBG6 1241 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 FAM8A1Q9UBU6 413 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 KIAA0232Q92628 1395 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 NVLO15381 856 aaKnown RBP12.19□□□□□ -0.46
PTCH1-205ENST00000418258 IGSF3O75054 1194 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 PSMC2P35998 433 aaKnown RBP12.19□□□□□ -0.46
PTCH1-205ENST00000418258 EFCAB13Q8IY85 973 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 ELMOD1Q8N336 334 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 SERPINB13Q9UIV8 391 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 MYOM2P54296 1465 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 WDR64B1ANS9 1081 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 EPHB1P54762 984 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 FAM26FQ5R3K3 315 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 DPH5Q9H2P9 285 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 EIF3CLB5ME19 914 aaKnown RBP12.19□□□□□ -0.46
PTCH1-205ENST00000418258 ACTN1P12814 892 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 PDXDC2PQ6P474 469 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 ACCSQ96QU6 501 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 EIF3CQ99613 913 aaKnown RBP12.19□□□□□ -0.46
PTCH1-205ENST00000418258 USH1CQ9Y6N9 552 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 HMGB1P1B2RPK0 211 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-205ENST00000418258 BAG2O95816 211 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 ABCD1P33897 745 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 SYDE2Q5VT97 1194 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 LRGUKQ96M69 825 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 KANSL2Q9H9L4 492 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 POC1B-GALNT4F8VUJ3 575 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 PDE1BQ01064 536 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 CLIC6Q96NY7 704 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 PCIF1Q9H4Z3 704 aa12.19□□□□□ -0.46
PTCH1-205ENST00000418258 MCF2LO15068 1137 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 INPP1P49441 399 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 NR2F2P24468 414 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 NAA35Q5VZE5 725 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 RPF1Q9H9Y2 349 aaKnown RBP12.18□□□□□ -0.46
PTCH1-205ENST00000418258 BTBD18B2RXH4 712 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 MAPK4P31152 587 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 IL6STP40189 918 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-205ENST00000418258 SIX6OS1Q8N1H7 587 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 SPDL1Q96EA4 605 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 ZNF341Q9BYN7 854 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 KLHL14Q9P2G3 628 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 PCDHA4Q9UN74 947 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-205ENST00000418258 HP1BP3Q5SSJ5 553 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-205ENST00000418258 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-205ENST00000418258 PPP4R4Q6NUP7 873 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 MEIS1O00470 390 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 LAD1O00515 517 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 PMLP29590 882 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 CIITAP33076 1130 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 LMNB2Q03252 620 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 DSTYKQ6XUX3 929 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 POTEDQ86YR6 584 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 MOSPD1Q9UJG1 213 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 PASKQ96RG2 1323 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 KCNA4P22459 653 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 PTH1RQ03431 593 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 CNOT6LQ96LI5 555 aaKnown RBP12.18□□□□□ -0.46
PTCH1-205ENST00000418258 HOMER3Q9NSC5 361 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 HYOU1Q9Y4L1 999 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
PTCH1-205ENST00000418258 CPP00450 1065 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 GAP43P17677 238 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 DYNLL1P63167 89 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 DYNLT1P63172 113 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 THOC5Q13769 683 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 LARP4BQ92615 738 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 SPATA17Q96L03 361 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 SOS2Q07890 1332 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 PSAPP07602 524 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 ARHGAP25P42331 645 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 COBLO75128 1261 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 ARL4AP40617 200 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 CIAPIN1Q6FI81 312 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 TTLL6Q8N841 843 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 TSC1Q92574 1164 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 NPR1P16066 1061 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 CLIC2O15247 247 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 SERPINB6P35237 376 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 RASSF7Q02833 373 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 ALKBH8Q96BT7 664 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 HEXIM2Q96MH2 286 aaKnown RBP12.17□□□□□ -0.46
PTCH1-205ENST00000418258 ARAP3Q8WWN8 1544 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 PPFIA2O75334 1257 aa12.17□□□□□ -0.46
PTCH1-205ENST00000418258 MUM1Q2TAK8 710 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms