RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TTC38Q5R3I4 469 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 C2CD5Q86YS7 1000 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 ZSCAN29Q8IWY8 852 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CCDC197Q8NCU1 140 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 LRRC45Q96CN5 670 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CHMP6Q96FZ7 201 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 RNF26Q9BY78 433 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CNNM2Q9H8M5 875 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 KCNMB3Q9NPA1 279 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CTNNA1P35221 906 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 MAGEA1P43355 309 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 ALX1Q15699 326 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 C14orf37Q86TY3 774 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 AGAP11Q8TF27 550 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 ZNF496Q96IT1 587 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 SLC5A4Q9NY91 659 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CPSF2Q9P2I0 782 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 TNS3Q68CZ2 1445 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 RAD51CO43502 376 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 AKR1B10O60218 316 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 PPARDQ03181 441 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 TCIRG1Q13488 830 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 MIIPQ5JXC2 388 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 PNMA8AQ86V59 439 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CSGALNACT2Q8N6G5 542 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 ANKS4BQ8N8V4 417 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 FANCBQ8NB91 859 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 CNKSR1Q969H4 720 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 ITFG2Q969R8 447 aa8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 INPP4AQ96PE3 977 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 DUSP9Q99956 384 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-202ENST00000418170 FESP07332 822 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 PRPHP41219 470 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 MKRN4PQ13434 485 aaPredicted RBP8.83□□□□□ -1
HMGXB4-202ENST00000418170 CUL1Q13616 776 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 BLMHQ13867 455 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 ITIH4Q14624 930 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 WTAPQ15007 396 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 UBE3CQ15386 1083 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 LPIN2Q92539 896 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 CENPTQ96BT3 561 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 KRT23Q9C075 422 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 RAB27AP51159 221 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 RPS6KA3P51812 740 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 ERVK-9P63128 1117 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 TNNC1P63316 161 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 HLTFQ14527 1009 aaKnown RBP eCLIP8.83□□□□□ -1
HMGXB4-202ENST00000418170 ERMARDQ5T6L9 678 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 TNFRSF25Q93038 417 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 CNOT10Q9H9A5 744 aaKnown RBP8.83□□□□□ -1
HMGXB4-202ENST00000418170 SLC52A2Q9HAB3 445 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 CWC25Q9NXE8 425 aaPredicted RBP8.83□□□□□ -1
HMGXB4-202ENST00000418170 NOVA2Q9UNW9 492 aaKnown RBP8.83□□□□□ -1
HMGXB4-202ENST00000418170 TACC3Q9Y6A5 838 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 MYH1P12882 1939 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 AHCYL1O43865 530 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 SNRPA1P09661 255 aaKnown RBP8.83□□□□□ -1
HMGXB4-202ENST00000418170 SEMA3FQ13275 785 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 IL17AQ16552 155 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 ANKRD13CQ8N6S4 541 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 GIMAP8Q8ND71 665 aaPredicted RBP8.83□□□□□ -1
HMGXB4-202ENST00000418170 CNOT6LQ96LI5 555 aaKnown RBP8.83□□□□□ -1
HMGXB4-202ENST00000418170 FAM129AQ9BZQ8 928 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 PANK4Q9NVE7 773 aa8.83□□□□□ -1
HMGXB4-202ENST00000418170 A6NHS1 94 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 BUB1O43683 1085 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 DIAPH2O60879 1101 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 MCAMP43121 646 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 MAGOHP61326 146 aaKnown RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 PKN1Q16512 942 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 AKNAD1Q5T1N1 836 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 TBC1D1Q86TI0 1168 aaPredicted RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 FAM114A1Q8IWE2 563 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 MAGOHBQ96A72 148 aaKnown RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 DHTKD1Q96HY7 919 aaPredicted RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 ZNF317Q96PQ6 595 aaPredicted RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 XPO6Q96QU8 1125 aaKnown RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 TMEM59LQ9UK28 342 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 DCDC2CA8MYV0 355 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 ASAP2O43150 1006 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 RHOBTB3O94955 611 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 CDC25CP30307 473 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 MTIF2P46199 727 aaKnown RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 MTMR3Q13615 1198 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 THEMIS2Q5TEJ8 643 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 TMTC2Q8N394 836 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 STRBPQ96SI9 672 aaKnown RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 FBXO3Q9UK99 471 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 CICQ96RK0 1608 aaPredicted RBP8.82□□□□□ -1
HMGXB4-202ENST00000418170 ZNF532Q9HCE3 1301 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 KLRC4O43908 158 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 LINGO3P0C6S8 592 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 CCND1P24385 295 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 STAT6P42226 847 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 RASSF7Q02833 373 aa8.82□□□□□ -1
HMGXB4-202ENST00000418170 ASTE1Q2TB18 679 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms