RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 SHOXO15266 292 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 IGLV1-40P01703 118 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 RIPK4P57078 832 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 SSRP1Q08945 709 aaKnown RBP7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 VPS72Q15906 364 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 SV2CQ496J9 727 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 AMOTQ4VCS5 1084 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 PLEKHO1Q53GL0 409 aaPredicted RBP7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 LILRB2Q8N423 598 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 Q96M66 194 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 OSBPL1AQ9BXW6 950 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 GP6Q9HCN6 339 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 FAM208AQ9UK61 1670 aaKnown RBP7.56□□□□□ -1.2
NIFKP3-201ENST00000417799 SPATA31A1Q5TZJ5 1347 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 KDM2BQ8NHM5 1336 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 PLCH1Q4KWH8 1693 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 GNAT3A8MTJ3 354 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 PRR33A8MZF0 331 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 WDR64B1ANS9 1081 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 AGRPO00253 132 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 ZNF865P0CJ78 1059 aaPredicted RBP7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 IL2RBP14784 551 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 FSTP19883 344 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 SDE2Q6IQ49 451 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 C22orf34Q6ZV56 151 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 DTWD2Q8NBA8 298 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 SPOCK3Q9BQ16 436 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 PRDM14Q9GZV8 571 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 WHRNQ9P202 907 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 THRAP3Q9Y2W1 955 aaKnown RBP7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 RGPD2P0DJD1 1756 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 PLEKHG2Q9H7P9 1386 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 NWD2Q9ULI1 1742 aa7.55□□□□□ -1.2
NIFKP3-201ENST00000417799 MEGF6O75095 1541 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 IQCA1LA6NCM1 817 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 MSTNO14793 375 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 HTATSF1O43719 755 aaKnown RBP7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 PPM1BO75688 479 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 PROCP04070 461 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 ITGA4P13612 1032 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 LMOD3Q0VAK6 560 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 SNW1Q13573 536 aaKnown RBP7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 NKAPLQ5M9Q1 402 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 ZNF530Q6P9A1 599 aaPredicted RBP7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 ARHGAP27Q6ZUM4 889 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 FAM177A1Q8N128 213 aaPredicted RBP7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 NLGN1Q8N2Q7 840 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 MFSD4AQ8N468 514 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 SH3TC2Q8TF17 1288 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 PPP1R14AQ96A00 147 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 LRP2BPQ9P2M1 347 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 APEX2Q9UBZ4 518 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 TRPC5Q9UL62 973 aaPredicted RBP7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 SUGT1Q9Y2Z0 365 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 NRAPQ86VF7 1730 aa7.54□□□□□ -1.2
NIFKP3-201ENST00000417799 ZNF521Q96K83 1311 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 OVOS2A0A0G2JMS6 1433 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 TNK2Q07912 1038 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 RSPO4Q2I0M5 234 aaPredicted RBP7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 C1orf141Q5JVX7 400 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 WDR63Q8IWG1 891 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 LRRC47Q8N1G4 583 aaKnown RBP7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 LRRN4CLQ8ND94 238 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 ZCRB1Q8TBF4 217 aaKnown RBP7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 THAP3Q8WTV1 239 aaPredicted RBP7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 RTF1Q92541 710 aaKnown RBP7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 SGSM3Q96HU1 749 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 SPATA9Q9BWV2 254 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 ASCC2Q9H1I8 757 aaPredicted RBP7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 CWC22Q9HCG8 908 aaKnown RBP7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 CAPN6Q9Y6Q1 641 aa7.53□□□□□ -1.2
NIFKP3-201ENST00000417799 DISP2A7MBM2 1401 aa7.52□□□□□ -1.2
NIFKP3-201ENST00000417799 MAP3K5Q99683 1374 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 A0A087WZG4 1122 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 FAM155AB1AL88 458 aaPredicted RBP7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 EXOC5O00471 708 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 OXCT1P55809 520 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 ZNF445P59923 1031 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 CPSF6Q16630 551 aaKnown RBP eCLIP7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 C2orf27AQ580R0 203 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 ZNF772Q68DY9 489 aaPredicted RBP7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 TMC3Q7Z5M5 1100 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 SLC51AQ86UW1 340 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 IFNL2Q8IZJ0 200 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 ZNF513Q8N8E2 541 aaPredicted RBP7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 BVESQ8NE79 360 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 ADCY4Q8NFM4 1077 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 PIWIL2Q8TC59 973 aaKnown RBP7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 BRF1Q92994 677 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 KANSL2Q9H9L4 492 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 LRRC4CQ9HCJ2 640 aa7.52□□□□□ -1.21
NIFKP3-201ENST00000417799 GFOD1Q9NXC2 390 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms