RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 MMP3P08254 477 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ALADP13716 330 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 MX1P20591 662 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 KCNA5P22460 613 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 DEFB103AP81534 67 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 STXBP2Q15833 593 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 LY6KQ17RY6 165 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 PUS10Q3MIT2 529 aaKnown RBP9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 LEXMQ3ZCV2 418 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GPATCH4Q5T3I0 446 aaKnown RBP9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 VPS53Q5VIR6 699 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CHST3Q7LGC8 479 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 KAT2BQ92831 832 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CTAGE1Q96RT6 745 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 IWS1Q96ST2 819 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 KATNAL1Q9BW62 490 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 HELLSQ9NRZ9 838 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 GTF2IRD1Q9UHL9 959 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 CTNNA3Q9UI47 895 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 INSL6Q9Y581 213 aa9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 COL4A4P53420 1690 aaPredicted RBP9.22□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SIP14410 1827 aa9.21□□□□□ -0.93
HLA-DPA1-241ENST00000417724 SNHG28P0DPA3 235 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PCP11498 1178 aaKnown RBP9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SSTR3P32745 418 aaPredicted RBP9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ARHGAP1Q07960 439 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PTK7Q13308 1070 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 LAMC2Q13753 1193 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 USH1GQ495M9 461 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 FAM117BQ6P1L5 589 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MFSD6Q6ZSS7 791 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MCF2L2Q86YR7 1114 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 FBXO22Q8NEZ5 403 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 OTUD7AQ8TE49 926 aaPredicted RBP9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DHX38Q92620 1227 aaKnown RBP9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 EVI5LQ96CN4 794 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TAAR1Q96RJ0 339 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 RMDN3Q96TC7 470 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HDAC6Q9UBN7 1215 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DDX41Q9UJV9 622 aaKnown RBP9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 XIRP2A4UGR9 3374 aa9.21□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PPFIA4O75335 1185 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 LGR5O75473 907 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 EIF3JO75822 258 aaKnown RBP9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 AMHP03971 560 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PSEN2P49810 448 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PTPROQ16827 1216 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 KIAA0753Q2KHM9 967 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MCMDC2Q4G0Z9 681 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZNF618Q5T7W0 954 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ARHGEF16Q5VV41 709 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PTCRAQ6ISU1 281 aaPredicted RBP9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TICAM2Q86XR7 235 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DHX37Q8IY37 1157 aaKnown RBP9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SYTL5Q8TDW5 730 aaPredicted RBP9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TBC1D5Q92609 795 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 EMID1Q96A84 441 aaPredicted RBP9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MRPL38Q96DV4 380 aaKnown RBP9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 UIMC1Q96RL1 719 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ALG1Q9BT22 464 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 UBA5Q9GZZ9 404 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 FAM50BQ9Y247 325 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MYH6P13533 1939 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ABCB11O95342 1321 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 EMSYQ7Z589 1322 aa9.2□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MICAL3Q7RTP6 2002 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HAS3O00219 553 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 F2P00734 622 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 GOLGA8HP0CJ92 632 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HSPD1P10809 573 aaKnown RBP9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MFSD10Q14728 455 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CDC37Q16543 378 aaPredicted RBP9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TCTN1Q2MV58 587 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CCDC178Q5BJE1 867 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 KCNV1Q6PIU1 500 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ALYREFQ86V81 257 aaKnown RBP9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DGKHQ86XP1 1220 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PPTC7Q8NI37 304 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ESR2Q92731 530 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SAMD11Q96NU1 681 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 C17orf80Q9BSJ5 609 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 RNF41Q9H4P4 317 aaPredicted RBP9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MRPL11Q9Y3B7 192 aaKnown RBP9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MRVI1Q9Y6F6 885 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZMYM6O95789 1325 aa9.19□□□□□ -0.94
HLA-DPA1-241ENST00000417724 RSPH10B2B2RC85 870 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NR3C2P08235 984 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 RSPH10BP0C881 870 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZNF286BP0CG31 522 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 IL9P15248 144 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 EIF2AK2P19525 551 aaKnown RBP9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 THPOP40225 353 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NT5C2P49902 561 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HAND2P61296 217 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HTRA4P83105 476 aaPredicted RBP9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZNF200P98182 395 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms