RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 TET1Q8NFU7 2136 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 VCANP13611 3396 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 A0A0U1RQG5 324 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-206ENST00000417540 STXBP3O00186 592 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 B4GALT4O60513 344 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 LARGE1O95461 756 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 TXNP10599 105 aaKnown RBP11.81□□□□□ -0.52
HDLBP-206ENST00000417540 KIF5BP33176 963 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 METAP2P50579 478 aaKnown RBP eCLIP11.81□□□□□ -0.522e-9■□□□□ 8.1
HDLBP-206ENST00000417540 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
HDLBP-206ENST00000417540 KRT32Q14532 448 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 MCF2L2Q86YR7 1114 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 RGS22Q8NE09 1264 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 AFG1LQ8WV93 481 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 PHKBQ93100 1093 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 MAP3K14Q99558 947 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 USP26Q9BXU7 913 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
HDLBP-206ENST00000417540 SEC63Q9UGP8 760 aaKnown RBP11.81□□□□□ -0.52
HDLBP-206ENST00000417540 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-206ENST00000417540 REC8O95072 547 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 NR3C2P08235 984 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 POLR2MP0CAP2 368 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 CAPN2P17655 700 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 ADD1P35611 737 aaKnown RBP11.8□□□□□ -0.52
HDLBP-206ENST00000417540 SP2Q02086 613 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 TRIM50Q86XT4 487 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 NSUN6Q8TEA1 469 aaKnown RBP11.8□□□□□ -0.52
HDLBP-206ENST00000417540 GLT1D1Q96MS3 346 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
HDLBP-206ENST00000417540 AGXT2Q9BYV1 514 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 UBE2OQ9C0C9 1292 aaKnown RBP11.8□□□□□ -0.52
HDLBP-206ENST00000417540 TRPV6Q9H1D0 765 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 TRMT13Q9NUP7 481 aaKnown RBP11.8□□□□□ -0.52
HDLBP-206ENST00000417540 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 MRVI1Q9Y6F6 885 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
HDLBP-206ENST00000417540 LOC102724159A0A0B4J2E5 919 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 ARVCFO00192 962 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 CALM1P0DP23 149 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 CALM2P0DP24 149 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 CALM3P0DP25 149 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 CCT2P78371 535 aaKnown RBP11.79□□□□□ -0.52
HDLBP-206ENST00000417540 PWP2Q15269 919 aaKnown RBP11.79□□□□□ -0.52
HDLBP-206ENST00000417540 C1orf53Q5VUE5 145 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 ANKRD33Q7Z3H0 272 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 KAT2BQ92831 832 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 AP5M1Q9H0R1 490 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 WNT8AQ9H1J5 351 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 SPC25Q9HBM1 224 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 PKD2L1Q9P0L9 805 aa11.79□□□□□ -0.52
HDLBP-206ENST00000417540 MICAL3Q7RTP6 2002 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 GGPS1O95749 300 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 CD4P01730 458 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 CYP2C9P11712 490 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 CCND2P30279 289 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 CDK7P50613 346 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 NAPAP54920 295 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 CHMP4BP1P59074 171 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 FGD1P98174 961 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 SP4Q02446 784 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 STK3Q13188 491 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 ITGA7Q13683 1181 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 HIC1Q14526 733 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 STXBP2Q15833 593 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 PKN1Q16512 942 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 ERICH6BQ5W0A0 696 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 IQSEC1Q6DN90 963 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 TDHQ8IZJ6 230 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 SLC43A3Q8NBI5 491 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 PCSK9Q8NBP7 692 aaKnown RBP11.78□□□□□ -0.52
HDLBP-206ENST00000417540 SMARCC2Q8TAQ2 1214 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 WNT8BQ93098 351 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 AIFM3Q96NN9 605 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 RBM28Q9NW13 759 aaKnown RBP11.78□□□□□ -0.52
HDLBP-206ENST00000417540 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
HDLBP-206ENST00000417540 DDX41Q9UJV9 622 aaKnown RBP11.78□□□□□ -0.52
HDLBP-206ENST00000417540 KIAA0355O15063 1070 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 GH1P01241 217 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 CYP2C18P33260 490 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 GNAQP50148 359 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 CPT1AP50416 773 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 NTRK3Q16288 839 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 HSDL1Q3SXM5 330 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 FAM47CQ5HY64 1035 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 FAM109BQ6ICB4 259 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-206ENST00000417540 RUFY3Q7L099 469 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 Q7L0L9 218 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 VWCEQ96DN2 955 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 INPP4AQ96PE3 977 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-206ENST00000417540 UIMC1Q96RL1 719 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 ANO3Q9BYT9 981 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms