RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 CENPPQ6IPU0 288 aa11.09□□□□□ -0.63
LINC00494-201ENST00000416742 TMCO3Q6UWJ1 677 aa11.09□□□□□ -0.63
LINC00494-201ENST00000416742 TMEM179Q6ZVK1 233 aa11.09□□□□□ -0.63
LINC00494-201ENST00000416742 CNKSR1Q969H4 720 aa11.09□□□□□ -0.63
LINC00494-201ENST00000416742 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
LINC00494-201ENST00000416742 TANGO6Q9C0B7 1094 aa11.09□□□□□ -0.63
LINC00494-201ENST00000416742 CLRN2A0PK11 232 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 C21orf2O43822 256 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 NDUFB10O96000 172 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 TFRCP02786 760 aaKnown RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 FECHP22830 423 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 PRR16Q569H4 304 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 KIAA1328Q86T90 577 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 MKL1Q969V6 931 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 CSRNP1Q96S65 589 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 GTPBP4Q9BZE4 634 aaKnown RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 MMRN2Q9H8L6 949 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 ZNF446Q9NWS9 450 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 POTEB3A0JP26 581 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 POTECB2RU33 542 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 GCFC2P16383 781 aaKnown RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 JAG1P78504 1218 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 WDR59Q6PJI9 974 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 POTEBQ6S5H4 581 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 FBXO11Q86XK2 927 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 AMNQ9BXJ7 453 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 PANK4Q9NVE7 773 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 NPHP3-ACAD11A0A0J9YXS1 232 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 SEC31AO94979 1220 aaKnown RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 ARHGAP25P42331 645 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 HDLBPQ00341 1268 aaKnown RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 TMEM119Q4V9L6 283 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 NELFCDQ8IXH7 590 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 GUF1Q8N442 669 aaKnown RBP11.08□□□□□ -0.64
LINC00494-201ENST00000416742 TSG101Q99816 390 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 CDC23Q9UJX2 597 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 SERPINA10Q9UK55 444 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 MYH4Q9Y623 1939 aa11.08□□□□□ -0.64
LINC00494-201ENST00000416742 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
LINC00494-201ENST00000416742 TRAF5O00463 557 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 IPO7O95373 1038 aaKnown RBP11.07□□□□□ -0.64
LINC00494-201ENST00000416742 HOXA13P31271 388 aaPredicted RBP11.07□□□□□ -0.64
LINC00494-201ENST00000416742 MIIPQ5JXC2 388 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 GOLGA1Q92805 767 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 DNAJC7Q99615 494 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
LINC00494-201ENST00000416742 MRIQ9BWK5 157 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 GLT8D2Q9H1C3 349 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 REXO2Q9Y3B8 237 aaKnown RBP11.07□□□□□ -0.64
LINC00494-201ENST00000416742 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 SPDYE3A6NKU9 549 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 RAD17O75943 681 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 FGFR1OPO95684 399 aaKnown RBP11.07□□□□□ -0.64
LINC00494-201ENST00000416742 PLA2G4BP0C869 781 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 BMP3P12645 472 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 ZNF76P36508 570 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 COASYQ13057 564 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
LINC00494-201ENST00000416742 VWA3BQ502W6 1294 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 FAM26FQ5R3K3 315 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 CCDC122Q5T0U0 273 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 NCAPH2Q6IBW4 605 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 GPBP1Q86WP2 473 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 MYOCDQ8IZQ8 938 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 KRT222Q8N1A0 295 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 NDST4Q9H3R1 872 aa11.07□□□□□ -0.64
LINC00494-201ENST00000416742 MEIS1O00470 390 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 MEIS2O14770 477 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 CYLC1P35663 651 aaPredicted RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 CHMP4BP1P59074 171 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 ZBED6P86452 979 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 ARHGAP4P98171 946 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 RRP1BQ14684 758 aaKnown RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 SMAP1Q8IYB5 467 aaPredicted RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 NAP1L4Q99733 375 aaKnown RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 NT5C3AQ9H0P0 336 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.06□□□□□ -0.642e-7■■□□□ 11.6
LINC00494-201ENST00000416742 TMOD2Q9NZR1 351 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 USP11P51784 963 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 CYP27A1Q02318 531 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 CCDC40Q4G0X9 1142 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 ZNF772Q68DY9 489 aaPredicted RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 CC2D2BQ6DHV5 1058 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 SRGAP1Q7Z6B7 1085 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 DNAJC19Q96DA6 116 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 P2RX7Q99572 595 aaKnown RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 NHEJ1Q9H9Q4 299 aaPredicted RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 YDJCA8MPS7 323 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 ENC1O14682 589 aa11.06□□□□□ -0.64
LINC00494-201ENST00000416742 GPR161Q8N6U8 529 aaKnown RBP11.06□□□□□ -0.64
LINC00494-201ENST00000416742 PARD6BQ9BYG5 372 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms