RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 KIF3AQ9Y496 699 aa15.65■□□□□ 0.1
CPNE1-209ENST00000415920 PCDHA1Q9Y5I3 950 aa15.65■□□□□ 0.1
CPNE1-209ENST00000415920 KIAA1217Q5T5P2 1943 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 DNAJC25-GNG10A0A024R161 153 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 STXBP3O00186 592 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 FDPSP14324 419 aaKnown RBP15.64■□□□□ 0.09
CPNE1-209ENST00000415920 ACLYP53396 1101 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 TRAF1Q13077 416 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 TRIM29Q14134 588 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 CCSAPQ6IQ19 270 aaPredicted RBP15.64■□□□□ 0.09
CPNE1-209ENST00000415920 KLHDC9Q8NEP7 349 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 CCDC148Q8NFR7 591 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 INTS4Q96HW7 963 aaKnown RBP15.64■□□□□ 0.09
CPNE1-209ENST00000415920 RNPC3Q96LT9 517 aaKnown RBP15.64■□□□□ 0.09
CPNE1-209ENST00000415920 ACAD9Q9H845 621 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 ZHX1Q9UKY1 873 aaPredicted RBP15.64■□□□□ 0.09
CPNE1-209ENST00000415920 PNMA2Q9UL42 364 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 VCANP13611 3396 aa15.64■□□□□ 0.09
CPNE1-209ENST00000415920 ATP2A1O14983 1001 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 RAG1P15918 1043 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 XBP1P17861 261 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 COPB2P35606 906 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 PPP1R18Q6NYC8 613 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 CCDC12Q8WUD4 166 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-209ENST00000415920 TRERF1Q96PN7 1200 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 TMEM39AQ9NV64 488 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 BARHL2Q9NY43 387 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 CNPY2Q9Y2B0 182 aa15.63■□□□□ 0.09
CPNE1-209ENST00000415920 PRUNE2Q8WUY3 3088 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 SPTBN5Q9NRC6 3674 aaKnown RBP15.62■□□□□ 0.09
CPNE1-209ENST00000415920 NFIBO00712 420 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 PTGS1P23219 599 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 ADCY7P51828 1080 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 GUCY1B3Q02153 619 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 FPGSQ05932 587 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 KCNA10Q16322 511 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 TKFCQ3LXA3 575 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 TYW1BQ6NUM6 668 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 ANKRD33Q7Z3H0 272 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 C8orf76Q96K31 380 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 STARD7Q9NQZ5 370 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 GJB4Q9NTQ9 266 aa15.62■□□□□ 0.09
CPNE1-209ENST00000415920 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
CPNE1-209ENST00000415920 DDX49Q9Y6V7 483 aaKnown RBP15.62■□□□□ 0.09
CPNE1-209ENST00000415920 FOSL2P15408 326 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 NLRP5P59047 1200 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 GRIN2CQ14957 1233 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 MAMDC4Q6UXC1 1216 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 SLC30A10Q6XR72 485 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.61■□□□□ 0.09
CPNE1-209ENST00000415920 FBXO40Q9UH90 709 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 TBX21Q9UL17 535 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 FAM184BQ9ULE4 1060 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 KCNJ14Q9UNX9 436 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 SYNGAP1Q96PV0 1343 aa15.61■□□□□ 0.09
CPNE1-209ENST00000415920 GRXCR1A8MXD5 290 aa15.6■□□□□ 0.09
CPNE1-209ENST00000415920 CTAGE5O15320 804 aa15.6■□□□□ 0.09
CPNE1-209ENST00000415920 CFBP00751 764 aa15.6■□□□□ 0.09
CPNE1-209ENST00000415920 C16orf59Q7L2K0 433 aa15.6■□□□□ 0.09
CPNE1-209ENST00000415920 CHST13Q8NET6 341 aa15.6■□□□□ 0.09
CPNE1-209ENST00000415920 CUL5Q93034 780 aa15.6■□□□□ 0.09
CPNE1-209ENST00000415920 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.6■□□□□ 0.094e-33■□□□□ 9.1
CPNE1-209ENST00000415920 TSEN34Q9BSV6 310 aaKnown RBP15.6■□□□□ 0.09
CPNE1-209ENST00000415920 KATNBL1Q9H079 304 aa15.6■□□□□ 0.09
CPNE1-209ENST00000415920 DOCK5Q9H7D0 1870 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 VPS37CA5D8V6 355 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-209ENST00000415920 SMCO2A6NFE2 343 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 H3BQV1 296 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 OPLAHO14841 1288 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 CNTN2Q02246 1040 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 ACVR2BQ13705 512 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 UBE2SQ16763 222 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 KRT40Q6A162 431 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 MSL3Q8N5Y2 521 aaKnown RBP15.59■□□□□ 0.09
CPNE1-209ENST00000415920 CLEC4DQ8WXI8 215 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 TOX2Q96NM4 488 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 C6orf50Q9HD87 102 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 A1CFQ9NQ94 594 aaKnown RBP15.59■□□□□ 0.09
CPNE1-209ENST00000415920 SH3GLB2Q9NR46 395 aa15.59■□□□□ 0.09
CPNE1-209ENST00000415920 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.58■□□□□ 0.08
CPNE1-209ENST00000415920 ESYT2A0FGR8 921 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 MOXD2PA6NHM9 499 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 DCDC2CA8MYV0 355 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 DUSP11O75319 330 aaKnown RBP15.58■□□□□ 0.08
CPNE1-209ENST00000415920 TIMP1P01033 207 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 ASGR1P07306 291 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 C6orf222P0C671 652 aaPredicted RBP15.58■□□□□ 0.08
CPNE1-209ENST00000415920 PDCP20941 246 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 DNAJB2P25686 324 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 CALML3P27482 149 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 CST5P28325 142 aaPredicted RBP15.58■□□□□ 0.08
CPNE1-209ENST00000415920 HOXA13P31271 388 aaPredicted RBP15.58■□□□□ 0.08
CPNE1-209ENST00000415920 PBX2P40425 430 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 CDK7P50613 346 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 CCDC144BQ3MJ40 725 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 RNF207Q6ZRF8 634 aa15.58■□□□□ 0.08
CPNE1-209ENST00000415920 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms