RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 UPK3BL1B0FP48 263 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 FAM155AB1AL88 458 aaPredicted RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 UPK3BL2E5RIL1 263 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 GREM1O60565 184 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 HTR3BO95264 441 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 CELF2O95319 508 aaKnown RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 CRKP46108 304 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 HDLBPQ00341 1268 aaKnown RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 PKN2Q16513 984 aaKnown RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 ANGEL2Q5VTE6 544 aaKnown RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 SLC6A19Q695T7 634 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 PNMA8AQ86V59 439 aaPredicted RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 SPACA3Q8IXA5 215 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 MRPL41Q8IXM3 137 aaKnown RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 PRDM5Q9NQX1 630 aaPredicted RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 KCNQ5Q9NR82 932 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 REV1Q9UBZ9 1251 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 SRP68Q9UHB9 627 aaKnown RBP7.19□□□□□ -1.26
CSTF1-202ENST00000415828 ADAM30Q9UKF2 790 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 PCDHB14Q9Y5E9 798 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 CFAP54Q96N23 3096 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 MUC6Q6W4X9 2439 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 GNAT3A8MTJ3 354 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 BIN1O00499 593 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 KIF23Q02241 960 aaPredicted RBP7.18□□□□□ -1.26
CSTF1-202ENST00000415828 NOGQ13253 232 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 NKPD1Q17RQ9 610 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 LETMD1Q6P1Q0 360 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 FBXO46Q6PJ61 603 aaPredicted RBP7.18□□□□□ -1.26
CSTF1-202ENST00000415828 NT5DC4Q86YG4 428 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 MCATQ8IVS2 390 aaKnown RBP7.18□□□□□ -1.26
CSTF1-202ENST00000415828 DEFB123Q8N688 67 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 LRRN4CLQ8ND94 238 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 ZCRB1Q8TBF4 217 aaKnown RBP7.18□□□□□ -1.26
CSTF1-202ENST00000415828 NKD1Q969G9 470 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 HHIPL1Q96JK4 782 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 PRDM7Q9NQW5 492 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 ZNF831Q5JPB2 1677 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 CARMIL3Q8ND23 1372 aa7.18□□□□□ -1.26
CSTF1-202ENST00000415828 POLRMTO00411 1230 aaKnown RBP7.17□□□□□ -1.26
CSTF1-202ENST00000415828 CAP2P40123 477 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 YARSP54577 528 aaKnown RBP7.17□□□□□ -1.26
CSTF1-202ENST00000415828 RACK1P63244 317 aaKnown RBP7.17□□□□□ -1.26
CSTF1-202ENST00000415828 MAP3K12Q12852 859 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 IKZF1Q13422 519 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 GK5Q6ZS86 529 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 ATG4DQ86TL0 474 aaPredicted RBP7.17□□□□□ -1.26
CSTF1-202ENST00000415828 CDH24Q86UP0 819 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 METTL16Q86W50 562 aaKnown RBP7.17□□□□□ -1.26
CSTF1-202ENST00000415828 ZNF654Q8IZM8 581 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 RIN3Q8TB24 985 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 ASB11Q8WXH4 323 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 EAF1Q96JC9 268 aaPredicted RBP7.17□□□□□ -1.26
CSTF1-202ENST00000415828 LRRC3Q9BY71 257 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 DDX41Q9UJV9 622 aaKnown RBP7.17□□□□□ -1.26
CSTF1-202ENST00000415828 CNTNAP4Q9C0A0 1308 aa7.17□□□□□ -1.26
CSTF1-202ENST00000415828 CHURC1-FNTBB4DL54 471 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 DLK2Q6UY11 383 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 KCNH5Q8NCM2 988 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 NT5C1AQ9BXI3 368 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 ZNF408Q9H9D4 720 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 HDAC9Q9UKV0 1011 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 MAPK8IP1Q9UQF2 711 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 USP34Q70CQ2 3546 aa7.16□□□□□ -1.26
CSTF1-202ENST00000415828 REV3LO60673 3130 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 CBX7O95931 251 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 RFC4P35249 363 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 TNNI2P48788 182 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 ZP2Q05996 745 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 TMEM201Q5SNT2 666 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 SLC23A3Q6PIS1 610 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 C2CD5Q86YS7 1000 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 PHACTR4Q8IZ21 702 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 PIGBQ92521 554 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 TAOK3Q9H2K8 898 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 MTMR10Q9NXD2 777 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.15□□□□□ -1.26
CSTF1-202ENST00000415828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.26
CSTF1-202ENST00000415828 LTBP3Q9NS15 1303 aa7.15□□□□□ -1.26
CSTF1-202ENST00000415828 COL4A5P29400 1685 aa7.15□□□□□ -1.27
CSTF1-202ENST00000415828 DNAJA2O60884 412 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 TBC1D8O95759 1140 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 EPS15P42566 896 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 ZNF165P49910 485 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 CLCN7P51798 805 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 CHMP4BP1P59074 171 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 CLCQ05315 142 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 SFRP5Q5T4F7 317 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 ZNF746Q6NUN9 644 aaPredicted RBP7.14□□□□□ -1.27
CSTF1-202ENST00000415828 POU5F2Q8N7G0 328 aa7.14□□□□□ -1.27
CSTF1-202ENST00000415828 SMARCC1Q92922 1105 aaPredicted RBP7.14□□□□□ -1.27
CSTF1-202ENST00000415828 LTV1Q96GA3 475 aaPredicted RBP7.14□□□□□ -1.27
CSTF1-202ENST00000415828 GLIS2Q9BZE0 524 aaPredicted RBP7.14□□□□□ -1.27
CSTF1-202ENST00000415828 TJP1Q07157 1748 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 CYP7A1P22680 504 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 HMGB2P26583 209 aaKnown RBP7.13□□□□□ -1.27
CSTF1-202ENST00000415828 TM4SF1P30408 202 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 HUNKP57058 714 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms