RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TBC1D10CQ8IV04 446 aa18.03■□□□□ 0.48
DDX56-202ENST00000415758 ANKS1AQ92625 1134 aa18.03■□□□□ 0.48
DDX56-202ENST00000415758 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
DDX56-202ENST00000415758 UBA5Q9GZZ9 404 aa18.03■□□□□ 0.48
DDX56-202ENST00000415758 EPHX3Q9H6B9 360 aa18.03■□□□□ 0.48
DDX56-202ENST00000415758 GTF2IRD1Q9UHL9 959 aa18.03■□□□□ 0.48
DDX56-202ENST00000415758 BRWD1Q9NSI6 2320 aa18.03■□□□□ 0.48
DDX56-202ENST00000415758 CCDC171Q6TFL3 1326 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 ABHD14A-ACY1A0A1B0GW23 586 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 LCHNA4D1U4 455 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 NBNO60934 754 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 GJB5O95377 273 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 CKBP12277 381 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 CHMP4BP1P59074 171 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 NMIQ13287 307 aaPredicted RBP18.02■□□□□ 0.48
DDX56-202ENST00000415758 DGKDQ16760 1214 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 SEPT14Q6ZU15 432 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 MCF2L2Q86YR7 1114 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 ESR2Q92731 530 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 RAD9AQ99638 391 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 LRFN3Q9BTN0 628 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 COL20A1Q9P218 1284 aa18.02■□□□□ 0.48
DDX56-202ENST00000415758 DDX41Q9UJV9 622 aaKnown RBP18.02■□□□□ 0.48
DDX56-202ENST00000415758 EFCAB14O75071 495 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
DDX56-202ENST00000415758 ERVK-21P61565 698 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 DEFB103AP81534 67 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 CDC37Q16543 378 aaPredicted RBP18.01■□□□□ 0.47
DDX56-202ENST00000415758 CCDC178Q5BJE1 867 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 ADGRF4Q8IZF3 695 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 PNMA1Q8ND90 353 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 RMDN3Q96TC7 470 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 ZBED2Q9BTP6 218 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 CPVLQ9H3G5 476 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 HDAC6Q9UBN7 1215 aa18.01■□□□□ 0.47
DDX56-202ENST00000415758 COL4A4P53420 1690 aaPredicted RBP18.01■□□□□ 0.47
DDX56-202ENST00000415758 HAS3O00219 553 aa18■□□□□ 0.47
DDX56-202ENST00000415758 PTK7Q13308 1070 aa18■□□□□ 0.47
DDX56-202ENST00000415758 HDAC1Q13547 482 aaPredicted RBP18■□□□□ 0.47
DDX56-202ENST00000415758 TMCO2Q7Z6W1 182 aaPredicted RBP18■□□□□ 0.47
DDX56-202ENST00000415758 C7orf31Q8N865 590 aa18■□□□□ 0.47
DDX56-202ENST00000415758 PPTC7Q8NI37 304 aa18■□□□□ 0.47
DDX56-202ENST00000415758 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
DDX56-202ENST00000415758 KATNAL1Q9BW62 490 aa18■□□□□ 0.47
DDX56-202ENST00000415758 MYH6P13533 1939 aa18■□□□□ 0.47
DDX56-202ENST00000415758 NEDD4P46934 1319 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.99■□□□□ 0.47
DDX56-202ENST00000415758 ZNF213O14771 459 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 GPR37L1O60883 481 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 F2P00734 622 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 HOXD8P13378 290 aaPredicted RBP17.99■□□□□ 0.47
DDX56-202ENST00000415758 HOXD11P31277 338 aaPredicted RBP17.99■□□□□ 0.47
DDX56-202ENST00000415758 PSEN2P49810 448 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
DDX56-202ENST00000415758 GHRHRQ02643 423 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 LAMC2Q13753 1193 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 IKBKEQ14164 716 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 TCTN1Q2MV58 587 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 TRIM71Q2Q1W2 868 aaKnown RBP17.99■□□□□ 0.47
DDX56-202ENST00000415758 ASPRV1Q53RT3 343 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 TRAF7Q6Q0C0 670 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 CHST3Q7LGC8 479 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 IQCA1Q86XH1 822 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 TGS1Q96RS0 853 aaKnown RBP17.99■□□□□ 0.47
DDX56-202ENST00000415758 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
DDX56-202ENST00000415758 MYH7BA7E2Y1 1941 aa17.99■□□□□ 0.47
DDX56-202ENST00000415758 LINC01553A4QN01 128 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 PPFIA4O75335 1185 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 NR3C2P08235 984 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 KIAA0753Q2KHM9 967 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 QRICH1Q2TAL8 776 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 TMEM31Q5JXX7 168 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 ARHGEF16Q5VV41 709 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 GDPD5Q8WTR4 605 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 KAT14Q9H8E8 782 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 PXMP2Q9NR77 195 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 SIP14410 1827 aa17.98■□□□□ 0.47
DDX56-202ENST00000415758 KDM4AO75164 1064 aa17.97■□□□□ 0.47
DDX56-202ENST00000415758 MFSD10Q14728 455 aa17.97■□□□□ 0.47
DDX56-202ENST00000415758 ZNF618Q5T7W0 954 aa17.97■□□□□ 0.47
DDX56-202ENST00000415758 KHSRPQ92945 711 aaKnown RBP eCLIP17.97■□□□□ 0.47
DDX56-202ENST00000415758 ALG1Q9BT22 464 aa17.97■□□□□ 0.47
DDX56-202ENST00000415758 JMJD4Q9H9V9 463 aa17.97■□□□□ 0.47
DDX56-202ENST00000415758 MAP3K20Q9NYL2 800 aaKnown RBP17.97■□□□□ 0.47
DDX56-202ENST00000415758 HCN4Q9Y3Q4 1203 aa17.97■□□□□ 0.47
DDX56-202ENST00000415758 LAMA4Q16363 1823 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 PI4K2BG5E9Z4 385 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 EIF2AK2P19525 551 aaKnown RBP17.96■□□□□ 0.47
DDX56-202ENST00000415758 SDSP20132 328 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 HSD17B4P51659 736 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 MKRN4PQ13434 485 aaPredicted RBP17.96■□□□□ 0.47
DDX56-202ENST00000415758 MBTPS1Q14703 1052 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 MYSM1Q5VVJ2 828 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 KCNV1Q6PIU1 500 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 DHX37Q8IY37 1157 aaKnown RBP17.96■□□□□ 0.47
DDX56-202ENST00000415758 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
DDX56-202ENST00000415758 WNT8BQ93098 351 aa17.96■□□□□ 0.47
DDX56-202ENST00000415758 ZSCAN10Q96SZ4 725 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms