RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TMEM110Q86TL2 294 aa22.52■■□□□ 1.2
AP1S3-205ENST00000415298 IFNL3Q8IZI9 196 aa22.52■■□□□ 1.2
AP1S3-205ENST00000415298 CCHCR1Q8TD31 782 aa22.52■■□□□ 1.2
AP1S3-205ENST00000415298 RUFY1Q96T51 708 aa22.52■■□□□ 1.2
AP1S3-205ENST00000415298 NACA2Q9H009 215 aa22.52■■□□□ 1.2
AP1S3-205ENST00000415298 GAKO14976 1311 aa22.52■■□□□ 1.2
AP1S3-205ENST00000415298 AGPSO00116 658 aa22.52■■□□□ 1.19
AP1S3-205ENST00000415298 MCM3P25205 808 aa22.52■■□□□ 1.19
AP1S3-205ENST00000415298 CDC25CP30307 473 aa22.52■■□□□ 1.19
AP1S3-205ENST00000415298 HAND2P61296 217 aa22.52■■□□□ 1.19
AP1S3-205ENST00000415298 CREB3L3Q68CJ9 461 aa22.52■■□□□ 1.19
AP1S3-205ENST00000415298 APOBEC3HQ6NTF7 200 aaKnown RBP22.52■■□□□ 1.19
AP1S3-205ENST00000415298 IQCF2Q8IXL9 164 aa22.52■■□□□ 1.19
AP1S3-205ENST00000415298 CYP21A2P08686 494 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 CNGA1P29973 690 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 SLC7A5Q01650 507 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 C9orf131Q5VYM1 1079 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 C6orf89Q6UWU4 347 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 RNF168Q8IYW5 571 aaPredicted RBP22.51■■□□□ 1.19
AP1S3-205ENST00000415298 UBE2OQ9C0C9 1292 aaKnown RBP22.51■■□□□ 1.19
AP1S3-205ENST00000415298 WDR35Q9P2L0 1181 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 RASSF10A6NK89 507 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 SLC27A2O14975 620 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 EIF6P56537 245 aaKnown RBP22.51■■□□□ 1.19
AP1S3-205ENST00000415298 EVX2Q03828 476 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 SLC4A8Q2Y0W8 1093 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 SMYD1Q8NB12 490 aa22.51■■□□□ 1.19
AP1S3-205ENST00000415298 JAKMIP1Q96N16 626 aaKnown RBP22.51■■□□□ 1.19
AP1S3-205ENST00000415298 RHBDL3P58872 404 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 PPP4CP60510 307 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 HDAC7Q8WUI4 952 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 TEKT4Q8WW24 435 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 TBC1D7Q9P0N9 293 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 SNX14Q9Y5W7 946 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 GOLGA8KD6RF30 607 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 PARP1P09874 1014 aaKnown RBP22.5■■□□□ 1.19
AP1S3-205ENST00000415298 GNAQP50148 359 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 ADCK5Q3MIX3 580 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 KBTBD12Q3ZCT8 623 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 PRMT6Q96LA8 375 aaPredicted RBP22.5■■□□□ 1.19
AP1S3-205ENST00000415298 TRPV5Q9NQA5 729 aa22.5■■□□□ 1.19
AP1S3-205ENST00000415298 TMEM221A6NGB7 291 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 BAG3O95817 575 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 HHIPL2Q6UWX4 724 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 CCAR1Q8IX12 1150 aaKnown RBP22.49■■□□□ 1.19
AP1S3-205ENST00000415298 TGFBRAP1Q8WUH2 860 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 EPN3Q9H201 632 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 A0A1B0GVL5 298 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 CTAGE15A4D2H0 777 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 CTAGE8P0CG41 777 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 CACNB3P54284 484 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 TNIP1Q15025 636 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 CFAP100Q494V2 611 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 Q6ZUG5 572 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 CTAGE6Q86UF2 777 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 SLF2Q8IX21 1173 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 CTAGE4Q8IX94 777 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 STK11IPQ8N1F8 1099 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 ZNF473Q8WTR7 871 aaKnown RBP22.49■■□□□ 1.19
AP1S3-205ENST00000415298 PCMTD2Q9NV79 361 aa22.49■■□□□ 1.19
AP1S3-205ENST00000415298 DICER1Q9UPY3 1922 aaKnown RBP22.48■■□□□ 1.19
AP1S3-205ENST00000415298 EGFRP00533 1210 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 USP17L8P0C7I0 530 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 GALNT17Q6IS24 598 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 SLC5A4Q9NY91 659 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 BAZ2AQ9UIF9 1905 aaKnown RBP22.48■■□□□ 1.19
AP1S3-205ENST00000415298 CYP2D7A0A087X1C5 515 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 ALDH3A1P30838 453 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 GMPSP49915 693 aaPredicted RBP22.48■■□□□ 1.19
AP1S3-205ENST00000415298 PABPC1LQ4VXU2 614 aaKnown RBP22.48■■□□□ 1.19
AP1S3-205ENST00000415298 NME8Q8N427 588 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 AGBL3Q8NEM8 1001 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 BPIFA3Q9BQP9 254 aa22.48■■□□□ 1.19
AP1S3-205ENST00000415298 NOP53Q9NZM5 478 aaKnown RBP22.48■■□□□ 1.19
AP1S3-205ENST00000415298 MYO3BQ8WXR4 1341 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 STXBP3O00186 592 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 OPLAHO14841 1288 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 GNAT2P19087 354 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 PKN1Q16512 942 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 CDC42EP5Q6NZY7 148 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 ZDHHC15Q96MV8 337 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 NAPBQ9H115 298 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 DCP1AQ9NPI6 582 aaPredicted RBP22.47■■□□□ 1.19
AP1S3-205ENST00000415298 GALNT8Q9NY28 637 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 SERPINA10Q9UK55 444 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 FRMD4BQ9Y2L6 1034 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 MYO1BO43795 1136 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 PFKFB2O60825 505 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 DDNO94850 711 aaPredicted RBP22.47■■□□□ 1.19
AP1S3-205ENST00000415298 NPTXRO95502 500 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 CPA1P15085 419 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 CUL4BQ13620 913 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 CCDC92Q53HC0 331 aaPredicted RBP22.47■■□□□ 1.19
AP1S3-205ENST00000415298 CDC37L1Q7L3B6 337 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 MAPKAPK5Q8IW41 473 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 TTC14Q96N46 770 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 CRNKL1Q9BZJ0 848 aaKnown RBP22.47■■□□□ 1.19
AP1S3-205ENST00000415298 USP40Q9NVE5 1235 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 BAIAP2L1Q9UHR4 511 aa22.47■■□□□ 1.19
AP1S3-205ENST00000415298 C2CD2Q9Y426 696 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms