RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SNX2O60749 519 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 AOC2O75106 756 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 GADD45BO75293 160 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 SKAP2O75563 359 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 MTRF1O75570 445 aaKnown RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 RHOBTB3O94955 611 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 CYP11A1P05108 521 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 MMEP08473 750 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 SLC5A1P13866 664 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 HCLS1P14317 486 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 GLULP15104 373 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 ZSCAN20P17040 1043 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 BTF3P20290 206 aaKnown RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 RAB6AP20340 208 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 CCNCP24863 283 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 SMARCA1P28370 1054 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 ITGAEP38570 1179 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 HTR3AP46098 478 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 PPM1FP49593 454 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 RBM5P52756 815 aaKnown RBP eCLIP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 LMNB2Q03252 620 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 DDX10Q13206 875 aaKnown RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 ZC3H12BQ5HYM0 836 aaKnown RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 ARMC4Q5T2S8 1044 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 ANO1Q5XXA6 986 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 IRGCQ6NXR0 463 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 MZT2BQ6NZ67 158 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 MZT2AQ6P582 158 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 SLC23A3Q6PIS1 610 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 KRT26Q7Z3Y9 468 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 CKAP2LQ8IYA6 745 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 C3orf58Q8NDZ4 430 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 TMC1Q8TDI8 760 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 UIMC1Q96RL1 719 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 FEZ1Q99689 392 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 HERPUD2Q9BSE4 406 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 ZC3H12CQ9C0D7 883 aaKnown RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 PLEKHA5Q9HAU0 1116 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 PDRG1Q9NUG6 133 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 CLIP2Q9UDT6 1046 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 STAP2Q9UGK3 403 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 AP4E1Q9UPM8 1137 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 PA2G4Q9UQ80 394 aaKnown RBP4.19□□□□□ -1.74
SF3B1-203ENST00000414174 N6AMT1Q9Y5N5 214 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 SNX5Q9Y5X3 404 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 SLC30A1Q9Y6M5 507 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 U3KQE9 123 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 RAD50Q92878 1312 aa4.19□□□□□ -1.74
SF3B1-203ENST00000414174 PNMA6FA0A0J9YX94 578 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 TMCO5BA8MYB1 307 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 AKR1B10O60218 316 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 KRT1P04264 644 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 P4HBP07237 508 aaKnown RBP4.18□□□□□ -1.74
SF3B1-203ENST00000414174 IFIT2P09913 472 aaKnown RBP4.18□□□□□ -1.74
SF3B1-203ENST00000414174 HALP42357 657 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 FCGRTP55899 365 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 PFKPQ01813 784 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 MCL1Q07820 350 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 EIF4A2Q14240 407 aaKnown RBP4.18□□□□□ -1.74
SF3B1-203ENST00000414174 KRT72Q14CN4 511 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 ZSCAN26Q16670 478 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 SWSAP1Q6NVH7 229 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 LVRNQ6Q4G3 990 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 NXPE4Q6UWF7 544 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 SYDE1Q6ZW31 735 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-203ENST00000414174 RASGRP2Q7LDG7 609 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 DYMQ7RTS9 669 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 PNMA8AQ86V59 439 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-203ENST00000414174 VPS37DQ86XT2 251 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 JAMLQ86YT9 394 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 ANKRD18AQ8IVF6 992 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 ARL10Q8N8L6 244 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 ENAHQ8N8S7 591 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-203ENST00000414174 AFAP1L1Q8TED9 768 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 HDAC7Q8WUI4 952 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 RSAD2Q8WXG1 361 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 APPBP2Q92624 585 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 NACC2Q96BF6 587 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 CORO1BQ9BR76 489 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 MAK16Q9BXY0 300 aaKnown RBP4.18□□□□□ -1.74
SF3B1-203ENST00000414174 BCO2Q9BYV7 579 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 MKNK2Q9HBH9 465 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 CYP4F11Q9HBI6 524 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 EXOC1Q9NV70 894 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 IRAK4Q9NWZ3 460 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 CFAP45Q9UL16 551 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 FAM184BQ9ULE4 1060 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 ATP8A1Q9Y2Q0 1164 aa4.18□□□□□ -1.74
SF3B1-203ENST00000414174 TMEM94Q12767 1356 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 CFAP65Q6ZU64 1925 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 F8VZ95 297 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 STXBP3O00186 592 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 TULP2O00295 520 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 KCNQ2O43526 872 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 PIP5K1CO60331 668 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 CLASP2O75122 1294 aaKnown RBP4.17□□□□□ -1.74
SF3B1-203ENST00000414174 KRT38O76015 456 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 F2P00734 622 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 INHBBP09529 407 aa4.17□□□□□ -1.74
SF3B1-203ENST00000414174 SFTPCP11686 197 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms