RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 VSIG10LQ86VR7 867 aa30.4■■■□□ 2.46
VEGFA-207ENST00000413642 TRPV6Q9H1D0 765 aa30.4■■■□□ 2.46
VEGFA-207ENST00000413642 DDX41Q9UJV9 622 aaKnown RBP30.4■■■□□ 2.46
VEGFA-207ENST00000413642 MYH6P13533 1939 aa30.39■■■□□ 2.46
VEGFA-207ENST00000413642 USP17L6PQ6QN14 398 aa30.39■■■□□ 2.46
VEGFA-207ENST00000413642 AFG1LQ8WV93 481 aa30.39■■■□□ 2.46
VEGFA-207ENST00000413642 PPP1R12CQ9BZL4 782 aa30.39■■■□□ 2.46
VEGFA-207ENST00000413642 TLR3O15455 904 aaKnown RBP30.38■■■□□ 2.45
VEGFA-207ENST00000413642 TIMP1P01033 207 aa30.38■■■□□ 2.45
VEGFA-207ENST00000413642 GH1P01241 217 aa30.38■■■□□ 2.45
VEGFA-207ENST00000413642 MTG1Q9BT17 334 aaPredicted RBP30.38■■■□□ 2.45
VEGFA-207ENST00000413642 MRVI1Q9Y6F6 885 aa30.38■■■□□ 2.45
VEGFA-207ENST00000413642 KLF18A0A0U1RQI7 1052 aa30.37■■■□□ 2.45
VEGFA-207ENST00000413642 SORBS3O60504 671 aa30.37■■■□□ 2.45
VEGFA-207ENST00000413642 GPKOWQ92917 476 aaPredicted RBP eCLIP30.37■■■□□ 2.459e-7■□□□□ 11
VEGFA-207ENST00000413642 ZBTB43O43298 467 aa30.36■■■□□ 2.45
VEGFA-207ENST00000413642 B4GALT4O60513 344 aa30.36■■■□□ 2.45
VEGFA-207ENST00000413642 REC8O95072 547 aa30.36■■■□□ 2.45
VEGFA-207ENST00000413642 HMGB1P09429 215 aaKnown RBP30.36■■■□□ 2.45
VEGFA-207ENST00000413642 BRDTQ58F21 947 aaPredicted RBP30.36■■■□□ 2.45
VEGFA-207ENST00000413642 MEIS2O14770 477 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 CCND2P30279 289 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 FPGSQ05932 587 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 RTN1Q16799 776 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 NBPF20Q3BBV1 942 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 ERICH6BQ5W0A0 696 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 Q6ZUG5 572 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 SMARCC2Q8TAQ2 1214 aa30.35■■■□□ 2.45
VEGFA-207ENST00000413642 FAM217BQ9NTX9 383 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-207ENST00000413642 NAP1L2Q9ULW6 460 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-207ENST00000413642 UMODL1Q5DID0 1318 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 CNTNAP5Q8WYK1 1306 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 GOLGA8AA7E2F4 631 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 GOLGA8BA8MQT2 603 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 CENPBP07199 599 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-207ENST00000413642 MMP3P08254 477 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 CYP2C18P33260 490 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 APOBRQ0VD83 1088 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 FUT2Q10981 343 aa30.34■■■□□ 2.45
VEGFA-207ENST00000413642 ALDH8A1Q9H2A2 487 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-207ENST00000413642 TRMT13Q9NUP7 481 aaKnown RBP30.34■■■□□ 2.45
VEGFA-207ENST00000413642 CDC27P30260 824 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 CHMP4BP1P59074 171 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 MRPS9P82933 396 aaKnown RBP30.33■■■□□ 2.45
VEGFA-207ENST00000413642 FGD1P98174 961 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 SP2Q02086 613 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 MFSD5Q6N075 450 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 BLOC1S2Q6QNY1 142 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 HEATR3Q7Z4Q2 680 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 CUL5Q93034 780 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 RBM28Q9NW13 759 aaKnown RBP30.33■■■□□ 2.45
VEGFA-207ENST00000413642 RTEL1Q9NZ71 1219 aa30.33■■■□□ 2.45
VEGFA-207ENST00000413642 FRMPD4Q14CM0 1322 aa30.32■■■□□ 2.44
VEGFA-207ENST00000413642 KPNA6O60684 536 aa30.32■■■□□ 2.44
VEGFA-207ENST00000413642 FAM47CQ5HY64 1035 aa30.32■■■□□ 2.44
VEGFA-207ENST00000413642 BRF1Q92994 677 aa30.32■■■□□ 2.44
VEGFA-207ENST00000413642 BCAS3Q9H6U6 928 aa30.32■■■□□ 2.44
VEGFA-207ENST00000413642 PSTPIP2Q9H939 334 aa30.32■■■□□ 2.44
VEGFA-207ENST00000413642 PIK3CDO00329 1044 aa30.31■■■□□ 2.44
VEGFA-207ENST00000413642 CSF2RAP15509 400 aa30.31■■■□□ 2.44
VEGFA-207ENST00000413642 RPS6KB1P23443 525 aa30.31■■■□□ 2.44
VEGFA-207ENST00000413642 UBE2SQ16763 222 aa30.31■■■□□ 2.44
VEGFA-207ENST00000413642 DHX37Q8IY37 1157 aaKnown RBP30.31■■■□□ 2.44
VEGFA-207ENST00000413642 SEZ6LQ9BYH1 1024 aa30.31■■■□□ 2.44
VEGFA-207ENST00000413642 V9GY48 417 aaPredicted RBP30.31■■■□□ 2.44
VEGFA-207ENST00000413642 CYP2C9P11712 490 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 LAMC2Q13753 1193 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 WWC2Q6AWC2 1192 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 Q7L0L9 218 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 C16orf59Q7L2K0 433 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 KAT2BQ92831 832 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 USP26Q9BXU7 913 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 HIPK3Q9H422 1215 aa30.3■■■□□ 2.44
VEGFA-207ENST00000413642 GGPS1O95749 300 aa30.29■■■□□ 2.44
VEGFA-207ENST00000413642 CASTP20810 708 aaKnown RBP30.29■■■□□ 2.44
VEGFA-207ENST00000413642 UBA1P22314 1058 aaKnown RBP30.29■■■□□ 2.44
VEGFA-207ENST00000413642 ADD1P35611 737 aaKnown RBP30.29■■■□□ 2.44
VEGFA-207ENST00000413642 MYSM1Q5VVJ2 828 aa30.29■■■□□ 2.44
VEGFA-207ENST00000413642 TYW1BQ6NUM6 668 aa30.29■■■□□ 2.44
VEGFA-207ENST00000413642 EMID1Q96A84 441 aaPredicted RBP30.29■■■□□ 2.44
VEGFA-207ENST00000413642 NOC4LQ9BVI4 516 aaKnown RBP30.29■■■□□ 2.44
VEGFA-207ENST00000413642 ACRP10323 421 aa30.28■■■□□ 2.44
VEGFA-207ENST00000413642 CCL23P55773 120 aa30.28■■■□□ 2.44
VEGFA-207ENST00000413642 CELF3Q5SZQ8 465 aaKnown RBP30.28■■■□□ 2.44
VEGFA-207ENST00000413642 SEMA3FQ13275 785 aa30.27■■■□□ 2.44
VEGFA-207ENST00000413642 KCNV1Q6PIU1 500 aa30.27■■■□□ 2.44
VEGFA-207ENST00000413642 TMEM199Q8N511 208 aa30.27■■■□□ 2.44
VEGFA-207ENST00000413642 RNPC3Q96LT9 517 aaKnown RBP30.27■■■□□ 2.44
VEGFA-207ENST00000413642 INPP4AQ96PE3 977 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-207ENST00000413642 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.27■■■□□ 2.441e-12■■■□□ 14.7
VEGFA-207ENST00000413642 ZNF286BP0CG31 522 aa30.26■■■□□ 2.43
VEGFA-207ENST00000413642 METAP2P50579 478 aaKnown RBP eCLIP30.26■■■□□ 2.437e-12■□□□□ 8.9
VEGFA-207ENST00000413642 DGKDQ16760 1214 aa30.26■■■□□ 2.43
VEGFA-207ENST00000413642 HSDL1Q3SXM5 330 aa30.26■■■□□ 2.43
VEGFA-207ENST00000413642 NFRKBQ6P4R8 1299 aa30.26■■■□□ 2.43
VEGFA-207ENST00000413642 PPTC7Q8NI37 304 aa30.26■■■□□ 2.43
VEGFA-207ENST00000413642 SPATA33Q96N06 139 aa30.26■■■□□ 2.43
VEGFA-207ENST00000413642 WNT8AQ9H1J5 351 aa30.26■■■□□ 2.43
VEGFA-207ENST00000413642 SPATA31C2B4DYI2 1134 aa30.25■■■□□ 2.43
VEGFA-207ENST00000413642 PSMA5P28066 241 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms