RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 FPGSQ05932 587 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 APOBRQ0VD83 1088 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 NBPF20Q3BBV1 942 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 LRIT3Q3SXY7 679 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 BRDTQ58F21 947 aaPredicted RBP11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 APOA5Q6Q788 366 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 Q6ZUG5 572 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 TMTC3Q6ZXV5 915 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 Q7L0L9 218 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 SLC43A3Q8NBI5 491 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 SMARCC2Q8TAQ2 1214 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 MAP3K20Q9NYL2 800 aaKnown RBP11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 TBX21Q9UL17 535 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 MROH7Q68CQ1 1323 aa11.75□□□□□ -0.53
NCKIPSD-202ENST00000413374 A6NJR5 290 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 CYP2C9P11712 490 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 CSF2RAP15509 400 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 CCND2P30279 289 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 GHRHRQ02643 423 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 ARHGAP1Q07960 439 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 UBE2SQ16763 222 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 RTN1Q16799 776 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 DHX37Q8IY37 1157 aaKnown RBP11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 CUL5Q93034 780 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 BCAS3Q9H6U6 928 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 V9GY48 417 aaPredicted RBP11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 UMODL1Q5DID0 1318 aa11.74□□□□□ -0.53
NCKIPSD-202ENST00000413374 RBAK-RBAKDNI3L0D1 243 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 MEIS2O14770 477 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 REC8O95072 547 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 MMP3P08254 477 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 HMGB1P09429 215 aaKnown RBP11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 CDC27P30260 824 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 ADD1P35611 737 aaKnown RBP11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 SP2Q02086 613 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 MFSD5Q6N075 450 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 SAMD3Q8N6K7 520 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 KCNB2Q92953 911 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 BRF1Q92994 677 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 FAM161BQ96MY7 647 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 ALDH8A1Q9H2A2 487 aaPredicted RBP11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 HIPK3Q9H422 1215 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 PSTPIP2Q9H939 334 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 DNAH12Q6ZR08 3092 aa11.73□□□□□ -0.53
NCKIPSD-202ENST00000413374 CEP290O15078 2479 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 MCM3APO60318 1980 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 KPNA6O60684 536 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 GGPS1O95749 300 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 CASTP20810 708 aaKnown RBP11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 C16orf59Q7L2K0 433 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 SCLYQ96I15 445 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 RNPC3Q96LT9 517 aaKnown RBP11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 SPATA33Q96N06 139 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.72□□□□□ -0.534e-6■■□□□ 11.8
NCKIPSD-202ENST00000413374 ALG1Q9BT22 464 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 MLXIPQ9HAP2 919 aa11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
NCKIPSD-202ENST00000413374 RANBP2P49792 3224 aaKnown RBP11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 ZNF286BP0CG31 522 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 PSMA5P28066 241 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 NAPAP54920 295 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 SP4Q02446 784 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 DGKDQ16760 1214 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 HSDL1Q3SXM5 330 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 CELF3Q5SZQ8 465 aaKnown RBP11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 MYSM1Q5VVJ2 828 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 WWC2Q6AWC2 1192 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 ZNF365Q70YC5 407 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 DEFB123Q8N688 67 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 KAT2BQ92831 832 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 PGBD1Q96JS3 809 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 NOC4LQ9BVI4 516 aaKnown RBP11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 USP26Q9BXU7 913 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 PCDHA6Q9UN73 950 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 TELO2Q9Y4R8 837 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 PCDHA8Q9Y5H6 950 aa11.71□□□□□ -0.53
NCKIPSD-202ENST00000413374 LCTP09848 1927 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 TRIOBPQ9H2D6 2365 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 SUPT20HL2P0C7V6 817 aa11.7□□□□□ -0.54
NCKIPSD-202ENST00000413374 UBA1P22314 1058 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms