RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 AKAP17AQ02040 695 aaKnown RBP15.12■□□□□ 0.01
HDAC8-210ENST00000412342 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
HDAC8-210ENST00000412342 CPLX2Q6PUV4 134 aaKnown RBP15.12■□□□□ 0.01
HDAC8-210ENST00000412342 TLK2Q86UE8 772 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 TRIM22Q8IYM9 498 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 NSUN7Q8NE18 718 aaKnown RBP15.12■□□□□ 0.01
HDAC8-210ENST00000412342 AIFM3Q96NN9 605 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 VPS54Q9P1Q0 977 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 PCDHA6Q9UN73 950 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 PHF24Q9UPV7 400 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 Q9Y3F1 56 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 PCDHA8Q9Y5H6 950 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 PDE4DIPQ5VU43 2346 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 DOCK5Q9H7D0 1870 aa15.12■□□□□ 0.01
HDAC8-210ENST00000412342 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 CDKL5O76039 1030 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 MYCLP12524 364 aaPredicted RBP15.11■□□□□ 0.01
HDAC8-210ENST00000412342 CCND2P30279 289 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 NPY5RQ15761 445 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 PCNX4Q63HM2 1172 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 SEPT14Q6ZU15 432 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 RNF180Q86T96 592 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 COPS5Q92905 334 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
HDAC8-210ENST00000412342 INPP4AQ96PE3 977 aaPredicted RBP15.11■□□□□ 0.01
HDAC8-210ENST00000412342 GLT8D2Q9H1C3 349 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 SH3GLB2Q9NR46 395 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
HDAC8-210ENST00000412342 DDX41Q9UJV9 622 aaKnown RBP15.11■□□□□ 0.01
HDAC8-210ENST00000412342 NKRFO15226 690 aaKnown RBP eCLIP15.1■□□□□ 0.01
HDAC8-210ENST00000412342 CD2BP2O95400 341 aaKnown RBP15.1■□□□□ 0.01
HDAC8-210ENST00000412342 C6orf222P0C671 652 aaPredicted RBP15.1■□□□□ 0.01
HDAC8-210ENST00000412342 TXNP10599 105 aaKnown RBP15.1■□□□□ 0.01
HDAC8-210ENST00000412342 SEMA3FQ13275 785 aa15.1■□□□□ 0.01
HDAC8-210ENST00000412342 AP3B2Q13367 1082 aa15.1■□□□□ 0.01
HDAC8-210ENST00000412342 TTLL4Q14679 1199 aa15.1■□□□□ 0.01
HDAC8-210ENST00000412342 XRRA1Q6P2D8 792 aa15.1■□□□□ 0.01
HDAC8-210ENST00000412342 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
HDAC8-210ENST00000412342 CRYGNQ8WXF5 182 aa15.1■□□□□ 0.01
HDAC8-210ENST00000412342 PGBD1Q96JS3 809 aa15.1■□□□□ 0.01
HDAC8-210ENST00000412342 TSEN34Q9BSV6 310 aaKnown RBP15.1■□□□□ 0.01
HDAC8-210ENST00000412342 ANO3Q9BYT9 981 aa15.1■□□□□ 0.01
HDAC8-210ENST00000412342 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 KBTBD13C9JR72 458 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 DYNC1LI2O43237 492 aaPredicted RBP15.09■□□□□ 0.01
HDAC8-210ENST00000412342 JAK2O60674 1132 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 STAM2O75886 525 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 ICAM3P32942 547 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 ACLYP53396 1101 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 BEX3Q00994 111 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 ARHGAP1Q07960 439 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 SNX17Q15036 470 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 KCNA10Q16322 511 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 FAM177A1Q8N128 213 aaPredicted RBP15.09■□□□□ 0.01
HDAC8-210ENST00000412342 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
HDAC8-210ENST00000412342 IL27Q8NEV9 243 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 CCDC148Q8NFR7 591 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 C6orf50Q9HD87 102 aa15.09■□□□□ 0.01
HDAC8-210ENST00000412342 A0A1W2PQ45 241 aaPredicted RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 A0A1W2PQY0 241 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 MOXD2PA6NHM9 499 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 M0R2N6 131 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 FOSP01100 380 aaPredicted RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 ITGB5P18084 799 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 GNA11P29992 359 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 SREBF1P36956 1147 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 SP2Q02086 613 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 FSCN1Q16658 493 aaKnown RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 LY6KQ17RY6 165 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 LRRC26Q2I0M4 334 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 JAKMIP3Q5VZ66 844 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 REXO1Q8N1G1 1221 aaKnown RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 DAGLBQ8NCG7 672 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 RASGRP4Q8TDF6 673 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 ZSCAN31Q96LW9 406 aaPredicted RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 HTATIP2Q9BUP3 242 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 SENP6Q9GZR1 1112 aaPredicted RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 SPC25Q9HBM1 224 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 ORC3Q9UBD5 711 aaPredicted RBP15.08■□□□□ 0
HDAC8-210ENST00000412342 UBIAD1Q9Y5Z9 338 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 MRVI1Q9Y6F6 885 aa15.08■□□□□ 0
HDAC8-210ENST00000412342 SCN10AQ9Y5Y9 1956 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 A6NJR5 290 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 SPATA31C2B4DYI2 1134 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 EDIL3O43854 480 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 ASGR1P07306 291 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 UBA1P22314 1058 aaKnown RBP15.07■□□□□ 0
HDAC8-210ENST00000412342 GNASQ5JWF2 1037 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 CCDC83Q8IWF9 413 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 PCSK9Q8NBP7 692 aaKnown RBP15.07■□□□□ 0
HDAC8-210ENST00000412342 OR6J1Q8NGC5 347 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 EMID1Q96A84 441 aaPredicted RBP15.07■□□□□ 0
HDAC8-210ENST00000412342 FERMT2Q96AC1 680 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 AP5M1Q9H0R1 490 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 SH2B1Q9NRF2 756 aaPredicted RBP15.07■□□□□ 0
HDAC8-210ENST00000412342 RTEL1Q9NZ71 1219 aa15.07■□□□□ 0
HDAC8-210ENST00000412342 PCDHA4Q9UN74 947 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms