RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 CCDC62Q6P9F0 684 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 SLC39A5Q6ZMH5 540 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 C7orf61Q8IZ16 206 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 PCSK9Q8NBP7 692 aaKnown RBP18.77■□□□□ 0.6
NOD1-202ENST00000411552 COPS5Q92905 334 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 RBM27Q9P2N5 1060 aaKnown RBP18.77■□□□□ 0.6
NOD1-202ENST00000411552 TPCN1Q9ULQ1 816 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 NR2E3Q9Y5X4 410 aa18.77■□□□□ 0.6
NOD1-202ENST00000411552 MOXD2PA6NHM9 499 aa18.76■□□□□ 0.59
NOD1-202ENST00000411552 NKRFO15226 690 aaKnown RBP eCLIP18.76■□□□□ 0.59
NOD1-202ENST00000411552 RGS20O76081 388 aa18.76■□□□□ 0.59
NOD1-202ENST00000411552 ASGR1P07306 291 aa18.76■□□□□ 0.59
NOD1-202ENST00000411552 NEK4P51957 841 aa18.76■□□□□ 0.59
NOD1-202ENST00000411552 AKAP17AQ02040 695 aaKnown RBP18.76■□□□□ 0.59
NOD1-202ENST00000411552 OR6J1Q8NGC5 347 aa18.76■□□□□ 0.59
NOD1-202ENST00000411552 ZFP91Q96JP5 570 aaPredicted RBP18.76■□□□□ 0.59
NOD1-202ENST00000411552 SLC26A6Q9BXS9 759 aa18.76■□□□□ 0.59
NOD1-202ENST00000411552 RNF26Q9BY78 433 aaPredicted RBP18.76■□□□□ 0.59
NOD1-202ENST00000411552 RIC8AQ9NPQ8 531 aa18.76■□□□□ 0.59
NOD1-202ENST00000411552 ADCY7P51828 1080 aa18.75■□□□□ 0.59
NOD1-202ENST00000411552 RTP1P59025 263 aa18.75■□□□□ 0.59
NOD1-202ENST00000411552 MRPS9P82933 396 aaKnown RBP18.75■□□□□ 0.59
NOD1-202ENST00000411552 SNX17Q15036 470 aa18.75■□□□□ 0.59
NOD1-202ENST00000411552 ANKRD1Q15327 319 aa18.75■□□□□ 0.59
NOD1-202ENST00000411552 LY6KQ17RY6 165 aa18.75■□□□□ 0.59
NOD1-202ENST00000411552 SMCO2A6NFE2 343 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 CPLX1O14810 134 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 PFKFB2O60825 505 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 SCRN1Q12765 414 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 KIF2CQ99661 725 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 C22orf23Q9BZE7 217 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 SLKQ9H2G2 1235 aaPredicted RBP18.74■□□□□ 0.59
NOD1-202ENST00000411552 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 DDX41Q9UJV9 622 aaKnown RBP18.74■□□□□ 0.59
NOD1-202ENST00000411552 MRVI1Q9Y6F6 885 aa18.74■□□□□ 0.59
NOD1-202ENST00000411552 MYH7BA7E2Y1 1941 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 SPDYE3A6NKU9 549 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 SSRP1Q08945 709 aaKnown RBP18.73■□□□□ 0.59
NOD1-202ENST00000411552 TRIM60Q495X7 471 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 C1orf53Q5VUE5 145 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 PCNX4Q63HM2 1172 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 CXCL17Q6UXB2 119 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 TEX2Q8IWB9 1127 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 TRIM22Q8IYM9 498 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 GLT1D1Q96MS3 346 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 PCDHA6Q9UN73 950 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 ATP11BQ9Y2G3 1177 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 PCDHA8Q9Y5H6 950 aa18.73■□□□□ 0.59
NOD1-202ENST00000411552 ZEB2O60315 1214 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 STAM2O75886 525 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 GH1P01241 217 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 CPT1AP50416 773 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 ARHGAP1Q07960 439 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 XRRA1Q6P2D8 792 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 CPLX2Q6PUV4 134 aaKnown RBP18.72■□□□□ 0.59
NOD1-202ENST00000411552 CCDC12Q8WUD4 166 aaPredicted RBP18.72■□□□□ 0.59
NOD1-202ENST00000411552 VTI1AQ96AJ9 217 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 INPP4AQ96PE3 977 aaPredicted RBP18.72■□□□□ 0.59
NOD1-202ENST00000411552 ZMYND12Q9H0C1 365 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 GLT8D2Q9H1C3 349 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 RTEL1Q9NZ71 1219 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 ZMYND8Q9ULU4 1186 aaPredicted RBP18.72■□□□□ 0.59
NOD1-202ENST00000411552 ELP1O95163 1332 aa18.72■□□□□ 0.59
NOD1-202ENST00000411552 ESYT2A0FGR8 921 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 A6NJR5 290 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 LARGE1O95461 756 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 RBM25P49756 843 aaKnown RBP18.71■□□□□ 0.59
NOD1-202ENST00000411552 ME3Q16798 604 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 KCNV1Q6PIU1 500 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 PGBD1Q96JS3 809 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 TMEM260Q9NX78 707 aa18.71■□□□□ 0.59
NOD1-202ENST00000411552 ADAMTS3O15072 1205 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 CABYRO75952 493 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 CDKL5O76039 1030 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 FOSP01100 380 aaPredicted RBP18.7■□□□□ 0.58
NOD1-202ENST00000411552 TGFB3P10600 412 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 SYN1P17600 705 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 CLK2P49760 499 aaKnown RBP18.7■□□□□ 0.58
NOD1-202ENST00000411552 RANBP2P49792 3224 aaKnown RBP18.7■□□□□ 0.58
NOD1-202ENST00000411552 SP2Q02086 613 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 TLE2Q04725 743 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 GNPTABQ3T906 1256 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 BRDTQ58F21 947 aaPredicted RBP18.7■□□□□ 0.58
NOD1-202ENST00000411552 NECAB1Q8N987 351 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 EMID1Q96A84 441 aaPredicted RBP18.7■□□□□ 0.58
NOD1-202ENST00000411552 EHMT1Q9H9B1 1298 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 C6orf50Q9HD87 102 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 POLR3EQ9NVU0 708 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 VPS54Q9P1Q0 977 aa18.7■□□□□ 0.58
NOD1-202ENST00000411552 A0A0U1RQG5 324 aaPredicted RBP18.69■□□□□ 0.58
NOD1-202ENST00000411552 SPATA31C2B4DYI2 1134 aa18.69■□□□□ 0.58
NOD1-202ENST00000411552 PQBP1O60828 265 aaKnown RBP18.69■□□□□ 0.58
NOD1-202ENST00000411552 DEXIO95424 95 aa18.69■□□□□ 0.58
NOD1-202ENST00000411552 MYL3P08590 195 aa18.69■□□□□ 0.58
NOD1-202ENST00000411552 UBA1P22314 1058 aaKnown RBP18.69■□□□□ 0.58
NOD1-202ENST00000411552 ICAM3P32942 547 aa18.69■□□□□ 0.58
NOD1-202ENST00000411552 PURAQ00577 322 aaKnown RBP18.69■□□□□ 0.58
NOD1-202ENST00000411552 SEMA3FQ13275 785 aa18.69■□□□□ 0.58
NOD1-202ENST00000411552 AP3B2Q13367 1082 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms