RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 P2RX5Q93086 422 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 NUP58Q9BVL2 599 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 SRRTQ9BXP5 876 aaKnown RBP15.18■□□□□ 0.02
LIMS1-205ENST00000410093 PDCL3Q9H2J4 239 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
LIMS1-205ENST00000410093 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
LIMS1-205ENST00000410093 COL4A5P29400 1685 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 USP27XA6NNY8 438 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 KIF20AO95235 890 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 NDUFB10O96000 172 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 SLC16A2P36021 539 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
LIMS1-205ENST00000410093 DNM2P50570 870 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 CACNB3P54284 484 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 GRB10Q13322 594 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 Q4G0T1 1027 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 TMTC1Q8IUR5 882 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 ERMNQ8TAM6 284 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 SNX29Q8TEQ0 813 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 CHURC1Q8WUH1 139 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 KLRG1Q96E93 195 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 FAM20AQ96MK3 541 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 TRMT1Q9NXH9 659 aaKnown RBP15.17■□□□□ 0.02
LIMS1-205ENST00000410093 GPRC5DQ9NZD1 345 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
LIMS1-205ENST00000410093 TMX2Q9Y320 296 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 SLC37A4O43826 429 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 MFAP3LO75121 409 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 TDP2O95551 362 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 GH2P01242 217 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
LIMS1-205ENST00000410093 LRRC63Q05C16 580 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 TTI2Q6NXR4 508 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 FAM160B2Q86V87 743 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 GUF1Q8N442 669 aaKnown RBP15.17■□□□□ 0.02
LIMS1-205ENST00000410093 DNAJC5GQ8N7S2 189 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 TRIM47Q96LD4 638 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 ANO3Q9BYT9 981 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 EHMT1Q9H9B1 1298 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 KCNMB3Q9NPA1 279 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 GDAQ9Y2T3 454 aa15.17■□□□□ 0.02
LIMS1-205ENST00000410093 LGALS16A8MUM7 142 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 EDIL3O43854 480 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 CYP3A4P08684 503 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 CCDC175P0C221 793 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 CIITAP33076 1130 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 SREBF1P36956 1147 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 STAT2P52630 851 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 MAP3K10Q02779 954 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 MAP1SQ66K74 1059 aaPredicted RBP15.16■□□□□ 0.02
LIMS1-205ENST00000410093 CRYGNQ8WXF5 182 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 PNMA5Q96PV4 448 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 PPP2R2CQ9Y2T4 447 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
LIMS1-205ENST00000410093 PSMD14O00487 310 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 MEIS2O14770 477 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 TEX33O43247 280 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 UBE2SQ16763 222 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 TSR1Q2NL82 804 aaKnown RBP15.15■□□□□ 0.02
LIMS1-205ENST00000410093 HSP90AA4PQ58FG1 418 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 CENPPQ6IPU0 288 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 CSGALNACT2Q8N6G5 542 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 HAS1Q92839 578 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 ERO1AQ96HE7 468 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 L2HGDHQ9H9P8 463 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 PNMA2Q9UL42 364 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 PCDHAC2Q9Y5I4 1007 aa15.15■□□□□ 0.02
LIMS1-205ENST00000410093 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 RBL2Q08999 1139 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 IKQ13123 557 aaPredicted RBP15.14■□□□□ 0.01
LIMS1-205ENST00000410093 TUBB2AQ13885 445 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 HSP90AA2PQ14568 343 aaPredicted RBP15.14■□□□□ 0.01
LIMS1-205ENST00000410093 REXO1L1PQ8IX06 675 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 MB21D1Q8N884 522 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 ZNF592Q92610 1267 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 TSG101Q99816 390 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 TUBB2BQ9BVA1 445 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 CNOT7Q9UIV1 285 aaKnown RBP15.14■□□□□ 0.01
LIMS1-205ENST00000410093 PITPNM2Q9BZ72 1349 aa15.14■□□□□ 0.01
LIMS1-205ENST00000410093 TMEM88BA6NKF7 163 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 GDF11O95390 407 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 SLU7O95391 586 aaKnown RBP15.13■□□□□ 0.01
LIMS1-205ENST00000410093 MUTP22033 750 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 RPS12P25398 132 aaKnown RBP15.13■□□□□ 0.01
LIMS1-205ENST00000410093 ADKP55263 362 aaKnown RBP15.13■□□□□ 0.01
LIMS1-205ENST00000410093 UBXN1Q04323 297 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 TNFAIP1Q13829 316 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 FIGNQ5HY92 759 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 CYP26C1Q6V0L0 522 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 SAMD3Q8N6K7 520 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 ZBED3Q96IU2 234 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-205ENST00000410093 PLIN2Q99541 437 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 LOXHD1Q8IVV2 1947 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
LIMS1-205ENST00000410093 PASKQ96RG2 1323 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms