RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TCEA3O75764 348 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 PHKG2P15735 406 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 KIR3DL1P43629 444 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 GBX1Q14549 363 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 AOC3Q16853 763 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 WDR78Q5VTH9 848 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 IQSEC1Q6DN90 963 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 ERAP2Q6P179 960 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 MAMDC2Q7Z304 686 aaPredicted RBP6.19□□□□□ -1.42
LSM5-205ENST00000409952 PCGF5Q86SE9 256 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 MORC1Q86VD1 984 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 KIF18BQ86Y91 864 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 PHACTR4Q8IZ21 702 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 CBARPQ8N350 705 aaPredicted RBP6.19□□□□□ -1.42
LSM5-205ENST00000409952 PAF1Q8N7H5 531 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 BVESQ8NE79 360 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 FGD4Q96M96 766 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 DPH2Q9BQC3 489 aaPredicted RBP6.19□□□□□ -1.42
LSM5-205ENST00000409952 LGR4Q9BXB1 951 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 SWAP70Q9UH65 585 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 RCAN3Q9UKA8 241 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 ANKRD6Q9Y2G4 727 aa6.19□□□□□ -1.42
LSM5-205ENST00000409952 RASSF10A6NK89 507 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 GNAT3A8MTJ3 354 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 C9IYK1 514 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 M0R2C6 588 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 ERC2O15083 957 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 PAX4O43316 350 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 TBX1O43435 398 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 CLEC3AO75596 197 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 MYBL2P10244 700 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 PF4V1P10720 104 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 TAL1P17542 331 aaPredicted RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 ITGB5P18084 799 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 ITIH2P19823 946 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 BDNFP23560 247 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 CCND1P24385 295 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 IRAK1P51617 712 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 SETQ01105 290 aaPredicted RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 LMOD3Q0VAK6 560 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 TMEM240Q5SV17 173 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 PIK3R6Q5UE93 754 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 ZCCHC8Q6NZY4 707 aaKnown RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 TP53INP2Q8IXH6 220 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 MFSD4AQ8N468 514 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 CRACR2BQ8N4Y2 399 aaPredicted RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 ENAHQ8N8S7 591 aaPredicted RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 CLIP3Q96DZ5 547 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 FUBP3Q96I24 572 aaKnown RBP eCLIP6.18□□□□□ -1.425e-8■■■□□ 17.6
LSM5-205ENST00000409952 MRGPRX3Q96LB0 322 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 ELAC2Q9BQ52 826 aaKnown RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 PUF60Q9UHX1 559 aaKnown RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 TPX2Q9ULW0 747 aaKnown RBP6.18□□□□□ -1.42
LSM5-205ENST00000409952 GIT1Q9Y2X7 761 aa6.18□□□□□ -1.42
LSM5-205ENST00000409952 RBAK-RBAKDNI3L0D1 243 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 PPM1BO75688 479 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 UBOX5O94941 541 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 APPP05067 770 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 CYP7A1P22680 504 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 CYP2C19P33261 490 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 CD96P40200 585 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 ETV3P41162 512 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 RECQLP46063 649 aaPredicted RBP6.17□□□□□ -1.42
LSM5-205ENST00000409952 FAPQ12884 760 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 GTF2H3Q13889 308 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 SART3Q15020 963 aaKnown RBP6.17□□□□□ -1.42
LSM5-205ENST00000409952 SKOR2Q2VWA4 1001 aaPredicted RBP6.17□□□□□ -1.42
LSM5-205ENST00000409952 INAVAQ3KP66 663 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 RGL3Q3MIN7 710 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 POMZP3Q6PJE2 187 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 THAP5Q7Z6K1 395 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 ADAT2Q7Z6V5 191 aaKnown RBP6.17□□□□□ -1.42
LSM5-205ENST00000409952 CDH24Q86UP0 819 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 TRIM59Q8IWR1 403 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 CCDC144CPQ8IYA2 1237 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 TMTC2Q8N394 836 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 CPA6Q8N4T0 437 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 PIWIL2Q8TC59 973 aaKnown RBP6.17□□□□□ -1.42
LSM5-205ENST00000409952 XAGE3Q8WTP9 111 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 ASB11Q8WXH4 323 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 KCTD13Q8WZ19 329 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 TTC17Q96AE7 1141 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 VWCEQ96DN2 955 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 WNK4Q96J92 1243 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 Q96M66 194 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 WHRNQ9P202 907 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 LZTS1Q9Y250 596 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 EMC9Q9Y3B6 208 aa6.17□□□□□ -1.42
LSM5-205ENST00000409952 BLACEA4D250 179 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 APAF1O14727 1248 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 IARSP41252 1262 aaKnown RBP6.16□□□□□ -1.42
LSM5-205ENST00000409952 ADCYAP1R1P41586 468 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 ZNF280AP59817 542 aaPredicted RBP6.16□□□□□ -1.42
LSM5-205ENST00000409952 IL2P60568 153 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 ERVK-21P61565 698 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 MAP4K2Q12851 820 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 GRM3Q14832 879 aa6.16□□□□□ -1.42
LSM5-205ENST00000409952 SAFBQ15424 915 aaKnown RBP eCLIP6.16□□□□□ -1.42
LSM5-205ENST00000409952 COBLL1Q53SF7 1204 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms