RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MORC3Q14149 939 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 TKFCQ3LXA3 575 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 MUM1L1Q5H9M0 696 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 LBX2Q6XYB7 198 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 DHX40Q8IX18 779 aaKnown RBP6.22□□□□□ -1.41
EPHA4-202ENST00000409854 KBTBD4Q9NVX7 518 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 CCDC39Q9UFE4 941 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 MAN1B1Q9UKM7 699 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 DOCK5Q9H7D0 1870 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 PLXNA1Q9UIW2 1896 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 ARID2Q68CP9 1835 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 GTPBP6O43824 516 aaPredicted RBP6.22□□□□□ -1.41
EPHA4-202ENST00000409854 BMP6P22004 513 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 CDC25AP30304 524 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 STAT6P42226 847 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 SEMA3FQ13275 785 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 TMEM132AQ24JP5 1023 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 TMEM119Q4V9L6 283 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 EAPPQ56P03 285 aaPredicted RBP6.22□□□□□ -1.41
EPHA4-202ENST00000409854 ARMC9Q7Z3E5 817 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 GRAMD1CQ8IYS0 662 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 CLMNQ96JQ2 1002 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 FAM20AQ96MK3 541 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 GSDMAQ96QA5 445 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 TTC12Q9H892 705 aaPredicted RBP6.22□□□□□ -1.41
EPHA4-202ENST00000409854 ELP3Q9H9T3 547 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 COL20A1Q9P218 1284 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 LRWD1Q9UFC0 647 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 A0A087WWV3 80 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 POTEIP0CG38 1075 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 POTEJP0CG39 1038 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 ALAS1P13196 640 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 PLCG1P19174 1290 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 GRB10Q13322 594 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 TMEM132BQ14DG7 1078 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 TREML2Q5T2D2 321 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 RRAGBQ5VZM2 374 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 MOB2Q70IA6 237 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 NIPA1Q7RTP0 329 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 LUZP1Q86V48 1076 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 SMARCE1Q969G3 411 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 PNMA5Q96PV4 448 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 NAT10Q9H0A0 1025 aaKnown RBP6.22□□□□□ -1.41
EPHA4-202ENST00000409854 HOXC10Q9NYD6 342 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 STK17AQ9UEE5 414 aa6.22□□□□□ -1.41
EPHA4-202ENST00000409854 POTEMA6NI47 508 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 MSH4O15457 936 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 SMC2O95347 1197 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 BCRP11274 1271 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 SETQ01105 290 aaPredicted RBP6.21□□□□□ -1.42
EPHA4-202ENST00000409854 CT47A1Q5JQC4 288 aaPredicted RBP6.21□□□□□ -1.42
EPHA4-202ENST00000409854 POTEEQ6S8J3 1075 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 FCHSD1Q86WN1 690 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 SYTL5Q8TDW5 730 aaPredicted RBP6.21□□□□□ -1.42
EPHA4-202ENST00000409854 TRERF1Q96PN7 1200 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 VAV3Q9UKW4 847 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 PCDHA12Q9UN75 941 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 RIPK3Q9Y572 518 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 MEIS1O00470 390 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 BIN1O00499 593 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 IKBKBO14920 756 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 AP5Z1O43299 807 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 CLSTN1O94985 981 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 FKBP1BP68106 108 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 PRR16Q569H4 304 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 PCNX4Q63HM2 1172 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 SNRNP48Q6IEG0 339 aaKnown RBP6.21□□□□□ -1.42
EPHA4-202ENST00000409854 CNNM4Q6P4Q7 775 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.21□□□□□ -1.42
EPHA4-202ENST00000409854 CPXCR1Q8N123 301 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 MB21D1Q8N884 522 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 SLC5A5Q92911 643 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 OTUD5Q96G74 571 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 TEX13BQ9BXU2 312 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 RNF146Q9NTX7 359 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 BLOC1S4Q9NUP1 217 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 AGTPBP1Q9UPW5 1226 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 STK24Q9Y6E0 443 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 KDM3AQ9Y4C1 1321 aa6.21□□□□□ -1.42
EPHA4-202ENST00000409854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.2□□□□□ -1.42
EPHA4-202ENST00000409854 SOCS7O14512 581 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 GJA5P36382 358 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 AFMP43652 599 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 RPS6P62753 249 aaKnown RBP6.2□□□□□ -1.42
EPHA4-202ENST00000409854 NCAPHQ15003 741 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 ZRSR1Q15695 479 aaKnown RBP6.2□□□□□ -1.42
EPHA4-202ENST00000409854 CEP55Q53EZ4 464 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 SARM1Q6SZW1 724 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 B3GNT9Q6UX72 402 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 SLC30A10Q6XR72 485 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 MLKLQ8NB16 471 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 BBXQ8WY36 941 aaPredicted RBP6.2□□□□□ -1.42
EPHA4-202ENST00000409854 OPTNQ96CV9 577 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 CALML4Q96GE6 196 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 NUDT12Q9BQG2 462 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 CTDP1Q9Y5B0 961 aaPredicted RBP6.2□□□□□ -1.42
EPHA4-202ENST00000409854 MYH11P35749 1972 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 ZNF236Q9UL36 1845 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 KLRC4O43908 158 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 PSMD10O75832 226 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms