RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SMPD1P17405 629 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 GNA11P29992 359 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 AP3B2Q13367 1082 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 BRDTQ58F21 947 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-205ENST00000409810 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 XRRA1Q6P2D8 792 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 SEPT14Q6ZU15 432 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 FAM177A1Q8N128 213 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-205ENST00000409810 BICD2Q8TD16 824 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 SENP6Q9GZR1 1112 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-205ENST00000409810 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
CHMP3-205ENST00000409810 DYNC1LI2O43237 492 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-205ENST00000409810 ST18O60284 1047 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 TXNP10599 105 aaKnown RBP12.5□□□□□ -0.41
CHMP3-205ENST00000409810 XBP1P17861 261 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 CPT1AP50416 773 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 NKX3-2P78367 333 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 PKN1Q16512 942 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 UBE2SQ16763 222 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 GNASQ5JWF2 1037 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 KLHDC9Q8NEP7 349 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 OR6J1Q8NGC5 347 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 WASF1Q92558 559 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 DPF3Q92784 378 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 ZMYND12Q9H0C1 365 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 PHF24Q9UPV7 400 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
CHMP3-205ENST00000409810 EVI5O60447 810 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 GH1P01241 217 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 KCNA10Q16322 511 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 FSCN1Q16658 493 aaKnown RBP12.49□□□□□ -0.41
CHMP3-205ENST00000409810 ME3Q16798 604 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 PCNX4Q63HM2 1172 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 IL31RAQ8NI17 732 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
CHMP3-205ENST00000409810 GLT1D1Q96MS3 346 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 KIF2CQ99661 725 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 LIMCH1Q9UPQ0 1083 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 NR2E3Q9Y5X4 410 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
CHMP3-205ENST00000409810 A0A1W2PQ45 241 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-205ENST00000409810 A0A1W2PQY0 241 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 MYADML2A6NDP7 307 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 CABYRO75952 493 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 TGFB3P10600 412 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 NLRP5P59047 1200 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 REXO1Q8N1G1 1221 aaKnown RBP12.48□□□□□ -0.41
CHMP3-205ENST00000409810 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 BACH2Q9BYV9 841 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 STARD7Q9NQZ5 370 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 SH2B1Q9NRF2 756 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-205ENST00000409810 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 VPS54Q9P1Q0 977 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 DOCK5Q9H7D0 1870 aa12.48□□□□□ -0.41
CHMP3-205ENST00000409810 ELP1O95163 1332 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 FIBPO43427 364 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 ARIH2O95376 493 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 ASGR1P07306 291 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 ICAM3P32942 547 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 CLK2P49760 499 aaKnown RBP12.47□□□□□ -0.41
CHMP3-205ENST00000409810 ACLYP53396 1101 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-205ENST00000409810 BEX3Q00994 111 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 CCSAPQ6IQ19 270 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-205ENST00000409810 GALNT17Q6IS24 598 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 FERMT2Q96AC1 680 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 INPP4AQ96PE3 977 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-205ENST00000409810 ORC3Q9UBD5 711 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-205ENST00000409810 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
CHMP3-205ENST00000409810 CEP290O15078 2479 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 SCN10AQ9Y5Y9 1956 aa12.47□□□□□ -0.41
CHMP3-205ENST00000409810 MROH7Q68CQ1 1323 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 A0A0U1RQG5 324 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-205ENST00000409810 CTAGE5O15320 804 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 KPNA6O60684 536 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 LARGE1O95461 756 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 SREBF1P36956 1147 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 MCM2P49736 904 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
CHMP3-205ENST00000409810 LAMC2Q13753 1193 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 NEDD9Q14511 834 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 SNX17Q15036 470 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 LY6KQ17RY6 165 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 LRRC26Q2I0M4 334 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 C1orf53Q5VUE5 145 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.41
CHMP3-205ENST00000409810 SLC39A5Q6ZMH5 540 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms