RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ERCC5P28715 1186 aaPredicted RBP15.86■□□□□ 0.13
LIMS2-206ENST00000409754 SREBF1P36956 1147 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 USP14P54578 494 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 ARHGAP4P98171 946 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 CCDC174Q6PII3 467 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 HAS1Q92839 578 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 P2RX7Q99572 595 aaKnown RBP15.86■□□□□ 0.13
LIMS2-206ENST00000409754 MMTAG2Q9BU76 263 aaKnown RBP15.86■□□□□ 0.13
LIMS2-206ENST00000409754 KBTBD4Q9NVX7 518 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 LRWD1Q9UFC0 647 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 ZKSCAN5Q9Y2L8 839 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 ABCB11O95342 1321 aa15.86■□□□□ 0.13
LIMS2-206ENST00000409754 TESPA1A2RU30 521 aaPredicted RBP15.85■□□□□ 0.13
LIMS2-206ENST00000409754 TAL1P17542 331 aaPredicted RBP15.85■□□□□ 0.13
LIMS2-206ENST00000409754 PLCG1P19174 1290 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 CASP1P29466 404 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 SEMA3FQ13275 785 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 CUL4BQ13620 913 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 PRPF38AQ8NAV1 312 aaKnown RBP15.85■□□□□ 0.13
LIMS2-206ENST00000409754 ENOX1Q8TC92 643 aaKnown RBP15.85■□□□□ 0.13
LIMS2-206ENST00000409754 STAMQ92783 540 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 CALML4Q96GE6 196 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 SLF1Q9BQI6 1058 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 TTC12Q9H892 705 aaPredicted RBP15.85■□□□□ 0.13
LIMS2-206ENST00000409754 AS3MTQ9HBK9 375 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 RRAGDQ9NQL2 400 aaPredicted RBP15.85■□□□□ 0.13
LIMS2-206ENST00000409754 PICK1Q9NRD5 415 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 FBXO28Q9NVF7 368 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 RMND1Q9NWS8 449 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 PARP14Q460N5 1801 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 RLFQ13129 1914 aa15.85■□□□□ 0.13
LIMS2-206ENST00000409754 A0A0G2JLL6 359 aaPredicted RBP15.84■□□□□ 0.13
LIMS2-206ENST00000409754 CYP3A4P08684 503 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 CIITAP33076 1130 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 MAP2K2P36507 400 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 Q4G0T1 1027 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 PRRT2Q7Z6L0 340 aaPredicted RBP15.84■□□□□ 0.13
LIMS2-206ENST00000409754 HSD3B7Q9H2F3 369 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 BLZF1Q9H2G9 400 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 KCNMB3Q9NPA1 279 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 HTTP42858 3142 aa15.84■□□□□ 0.13
LIMS2-206ENST00000409754 GCOM1H8Y6P7 765 aaPredicted RBP15.83■□□□□ 0.13
LIMS2-206ENST00000409754 TBX3O15119 743 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 SLC26A4O43511 780 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 MARCH6O60337 910 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 RPN1P04843 607 aaKnown RBP15.83■□□□□ 0.13
LIMS2-206ENST00000409754 ICAM1P05362 532 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 POLR2MP0CAP2 368 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 SPP2Q13103 211 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 MTMR2Q13614 643 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 GPAT2Q6NUI2 795 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 SLFN12Q8IYM2 578 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 SPC24Q8NBT2 197 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 LRRC15Q8TF66 581 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 EMILIN3Q9NT22 766 aa15.83■□□□□ 0.13
LIMS2-206ENST00000409754 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.83■□□□□ 0.13
LIMS2-206ENST00000409754 MSNP26038 577 aaKnown RBP15.83■□□□□ 0.12
LIMS2-206ENST00000409754 HOXA13P31271 388 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-206ENST00000409754 TM4SF4P48230 202 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 BACE1P56817 501 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 KCNB1Q14721 858 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 KRT79Q5XKE5 535 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 DRC7Q8IY82 874 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 ZNF280CQ8ND82 737 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 PLIN2Q99541 437 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 PCDHA12Q9UN75 941 aa15.83■□□□□ 0.12
LIMS2-206ENST00000409754 CCL15-CCL14A0A0B4J2E2 113 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 POTEMA6NI47 508 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 VCAM1P19320 739 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 AMPD3Q01432 767 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 GRB10Q13322 594 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 CCL15Q16663 113 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 PNMA5Q96PV4 448 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 R3HDMLQ9H3Y0 253 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 EHMT1Q9H9B1 1298 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 WBP1LQ9NX94 342 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 PNMA2Q9UL42 364 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.82■□□□□ 0.12
LIMS2-206ENST00000409754 ZNF536O15090 1300 aa15.82■□□□□ 0.12
LIMS2-206ENST00000409754 MANSC4A6NHS7 340 aaPredicted RBP15.81■□□□□ 0.12
LIMS2-206ENST00000409754 PPP1R3GB7ZBB8 358 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 BTBD19C9JJ37 291 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 CXCL11O14625 94 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 CFBP00751 764 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 FDX1P10109 184 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 HMGCS2P54868 508 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 FANCCQ00597 558 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 TMEM119Q4V9L6 283 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 SH3D19Q5HYK7 790 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 TREML2Q5T2D2 321 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 ZNF658Q5TYW1 1059 aaPredicted RBP15.81■□□□□ 0.12
LIMS2-206ENST00000409754 ETNPPLQ8TBG4 499 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 SNX29Q8TEQ0 813 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 LENG9Q96B70 501 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 CDK5RAP3Q96JB5 506 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 C12orf42Q96LP6 360 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 C7orf25Q9BPX7 421 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 TANGO6Q9C0B7 1094 aa15.81■□□□□ 0.12
LIMS2-206ENST00000409754 SLC38A10Q9HBR0 1119 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms