RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TBK1Q9UHD2 729 aa9.15□□□□□ -0.95
SCN9A-203ENST00000409672 SNX14Q9Y5W7 946 aa9.15□□□□□ -0.95
SCN9A-203ENST00000409672 PRPF4O43172 522 aaKnown RBP eCLIP9.15□□□□□ -0.956e-9■□□□□ 11.3
SCN9A-203ENST00000409672 PHKA1P46020 1223 aa9.15□□□□□ -0.95
SCN9A-203ENST00000409672 KRT82Q9NSB4 513 aa9.15□□□□□ -0.95
SCN9A-203ENST00000409672 PIM2Q9P1W9 311 aa9.15□□□□□ -0.95
SCN9A-203ENST00000409672 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
SCN9A-203ENST00000409672 NEURL1BA8MQ27 555 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 XPOTO43592 962 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 STX2P32856 288 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 CYP27A1Q02318 531 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 CAPRIN1Q14444 709 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 MARCH10Q8NA82 808 aaPredicted RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 DNAJC7Q99615 494 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 LZTS2Q9BRK4 669 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 CAPN10Q9HC96 672 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 USP17L8P0C7I0 530 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 COPB2P35606 906 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 TMEM62Q0P6H9 643 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 NME3Q13232 169 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 SMYD4Q8IYR2 804 aaPredicted RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 TTLL6Q8N841 843 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 URGCPQ8TCY9 931 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 AFAP1L1Q8TED9 768 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 HVCN1Q96D96 273 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 A0A1W2PP64 1363 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 RSPH10B2B2RC85 870 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 RSPH10BP0C881 870 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 PHBP35232 272 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 ADAM9Q13443 819 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 DARS2Q6PI48 645 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 IFT122Q9HBG6 1241 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 DNAJC17Q9NVM6 304 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 TFRCP02786 760 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 ADD1P35611 737 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 SYCE1Q8N0S2 351 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 TTC1Q99614 292 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 DDX41Q9UJV9 622 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 CREB3O43889 395 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 MORC3Q14149 939 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 CEP128Q6ZU80 1094 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 DESI2Q9BSY9 194 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 PUS3Q9BZE2 481 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 VCXQ9H320 206 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 ZNF157P51786 506 aaPredicted RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 PRAMEF18Q5VWM3 479 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 CATSPER4Q7RTX7 472 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 FAM71BQ8TC56 605 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 CFAP69A5D8W1 941 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 UVSSAQ2YD98 709 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 KRT71Q3SY84 523 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 GRIN2AQ12879 1464 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 ASMTLO95671 621 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 TTLL1O95922 423 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 ZNF853P0CG23 659 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 TRMT10CQ7L0Y3 403 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 THEM5Q8N1Q8 247 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 ANKRD13CQ8N6S4 541 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 SH3KBP1Q96B97 665 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 PPWD1Q96BP3 646 aaKnown RBP9.14□□□□□ -0.95
SCN9A-203ENST00000409672 NT5C3AQ9H0P0 336 aa9.14□□□□□ -0.95
SCN9A-203ENST00000409672 BASP1P80723 227 aaKnown RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 DBN1Q16643 649 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 ZBTB38Q8NAP3 1195 aaPredicted RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 SDCCAG3Q96C92 435 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 NFE2L3Q9Y4A8 694 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 NDUFAB1O14561 156 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 RHPN2Q8IUC4 686 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 ZNF507Q8TCN5 953 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 MAGEB10Q96LZ2 347 aaPredicted RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 PI4K2BG5E9Z4 385 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CUTAO60888 179 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 SYF2O95926 243 aaKnown RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 GARSP41250 739 aaKnown RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 NEK8Q86SG6 692 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 RNF135Q8IUD6 432 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 KCNJ18B7U540 433 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 PPFIA4O75335 1185 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 KCNJ12Q14500 433 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CACTINQ8WUQ7 758 aaKnown RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 DEPDC1BQ8WUY9 529 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 RGS16O15492 202 aaPredicted RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 MOCS2O96007 188 aaPredicted RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CTSHP09668 335 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CTTNQ14247 550 aaKnown RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 TDRD3Q9H7E2 651 aaKnown RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 INTUQ9ULD6 942 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 NSD2O96028 1365 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 ATF2P15336 505 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 MFSD4BQ5TF39 518 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 DYRK4Q9NR20 520 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 HPCAL4Q9UM19 191 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 FAM47DPA6NHR8 397 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 GADD45BO75293 160 aaPredicted RBP9.13□□□□□ -0.95
SCN9A-203ENST00000409672 HMBSP08397 361 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 HOXD10P28358 340 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 CXCR5P32302 372 aa9.13□□□□□ -0.95
SCN9A-203ENST00000409672 KRT26Q7Z3Y9 468 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms