RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 ZMYM2Q9UBW7 1377 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 FNDC1Q4ZHG4 1894 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 EMSYQ7Z589 1322 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 SOWAHBA6NEL2 793 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 TRAF5O00463 557 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 SLC37A4O43826 429 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 ADCY7P51828 1080 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 HERVK_113P62684 666 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 DNM1Q05193 864 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 BMT2Q1RMZ1 405 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 SKOR2Q2VWA4 1001 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 TAPT1Q6NXT6 567 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 KCTD1Q719H9 257 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 LARP6Q9BRS8 491 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 R3HDMLQ9H3Y0 253 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 CFAP45Q9UL16 551 aa5.55□□□□□ -1.52
R3HDM1-203ENST00000409606 IGKV6-21A0A0C4DH24 114 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 G3V3G9 751 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 PPP1R37O75864 691 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 CELF2O95319 508 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 XRCC6P12956 609 aaKnown RBP eCLIP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 RXRAP19793 462 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 DEKP35659 375 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SLC1A4P43007 532 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SLC4A3P48751 1232 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 ADAM17P78536 824 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 DCAF8Q5TAQ9 597 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 OTUD7BQ6GQQ9 843 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 OTOP1Q7RTM1 612 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 FBXO11Q86XK2 927 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 TMEM60Q9H2L4 133 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 CLSTN2Q9H4D0 955 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 AGO4Q9HCK5 861 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 BLOC1S4Q9NUP1 217 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 BAZ2BQ9UIF8 2168 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 CNPY2Q9Y2B0 182 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 MRPL11Q9Y3B7 192 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 FRMPD2Q68DX3 1309 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 PPP1R12BO60237 982 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 GADD45BO75293 160 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 ITGB5P18084 799 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SPP2Q13103 211 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 KCNB1Q14721 858 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 TARBP2Q15633 366 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 MCF2L2Q86YR7 1114 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 NUP88Q99567 741 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 MXRA8Q9BRK3 442 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 TMEM106CQ9BVX2 250 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 TEX13BQ9BXU2 312 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 ANO3Q9BYT9 981 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SPATC1LQ9H0A9 340 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 C6orf50Q9HD87 102 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 FBXO40Q9UH90 709 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 DBR1Q9UK59 544 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SMCO2A6NFE2 343 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 ZBTB42B2RXF5 422 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 TMEM232C9JQI7 657 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 GOLGA8HP0CJ92 632 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SCP2P22307 547 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 RTP1P59025 263 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 DPYDQ12882 1025 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 MKRN4PQ13434 485 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 DPY19L2P1Q6NXN4 242 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SYNE3Q6ZMZ3 975 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 APTXQ7Z2E3 356 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 NEK8Q86SG6 692 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 SESTD1Q86VW0 696 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 CMTR1Q8N1G2 835 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 FAM43AQ8N2R8 423 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 NEK9Q8TD19 979 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 MED15Q96RN5 788 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 C7orf25Q9BPX7 421 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 VEZTQ9HBM0 779 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 A1CFQ9NQ94 594 aaKnown RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 MAFBQ9Y5Q3 323 aaPredicted RBP5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 NR2E3Q9Y5X4 410 aa5.54□□□□□ -1.52
R3HDM1-203ENST00000409606 STRNO43815 780 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 MBD3O95983 291 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 ADRB2P07550 413 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 MAPTP10636 758 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 CST5P28325 142 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 SLC12A3P55017 1021 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 GRIN1Q05586 938 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 FAM160A1Q05DH4 1040 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 RBL2Q08999 1139 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 ITGB3BPQ13352 177 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 CPLX2Q6PUV4 134 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 SLC30A10Q6XR72 485 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 IFNLR1Q8IU57 520 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 REXO1Q8N1G1 1221 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 SLC17A8Q8NDX2 589 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 GPKOWQ92917 476 aaPredicted RBP eCLIP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 ATG4CQ96DT6 458 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 ZNF396Q96N95 335 aaPredicted RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 MOV10L1Q9BXT6 1211 aaKnown RBP5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 FBXO28Q9NVF7 368 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 KCND2Q9NZV8 630 aa5.53□□□□□ -1.52
R3HDM1-203ENST00000409606 TMEM63CQ9P1W3 806 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms