RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 FCER1AP12319 257 aa23.16■■□□□ 1.3
USP39-203ENST00000409470 ZNF76P36508 570 aa23.16■■□□□ 1.3
USP39-203ENST00000409470 UNC13DQ70J99 1090 aa23.16■■□□□ 1.3
USP39-203ENST00000409470 VPS16Q9H269 839 aa23.16■■□□□ 1.3
USP39-203ENST00000409470 TMX1Q9H3N1 280 aa23.16■■□□□ 1.3
USP39-203ENST00000409470 FBXO28Q9NVF7 368 aa23.16■■□□□ 1.3
USP39-203ENST00000409470 PVALEFA0A1B0GWK0 134 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 LRRC10BA6NIK2 292 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 FZD9O00144 591 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 TBX3O15119 743 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 COPB1P53618 953 aaKnown RBP23.15■■□□□ 1.3
USP39-203ENST00000409470 ADKP55263 362 aaKnown RBP23.15■■□□□ 1.3
USP39-203ENST00000409470 E4F1Q66K89 784 aaPredicted RBP23.15■■□□□ 1.3
USP39-203ENST00000409470 ETNPPLQ8TBG4 499 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 TAB2Q9NYJ8 693 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.15■■□□□ 1.3
USP39-203ENST00000409470 HACL1Q9UJ83 578 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 MRPL11Q9Y3B7 192 aaKnown RBP23.15■■□□□ 1.3
USP39-203ENST00000409470 BICDL2A1A5D9 508 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 FAM86B1E9PN63 330 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 GCOM1H8Y6P7 765 aaPredicted RBP23.15■■□□□ 1.3
USP39-203ENST00000409470 FAM86B2P0C5J1 330 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 POLR2MP0CAP2 368 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 STAT3P40763 770 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 PTPN14Q15678 1187 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 HYIQ5T013 277 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 PPFIBP1Q86W92 1011 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 TEX2Q8IWB9 1127 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 P2RX5Q93086 422 aa23.15■■□□□ 1.3
USP39-203ENST00000409470 SRRTQ9BXP5 876 aaKnown RBP23.15■■□□□ 1.3
USP39-203ENST00000409470 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
USP39-203ENST00000409470 IDEP14735 1019 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 CCNE1P24864 410 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 CIITAP33076 1130 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 PRELPP51888 382 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 TTI2Q6NXR4 508 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 TC2NQ8N9U0 490 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 DDX12PQ92771 950 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 HPS3Q969F9 1004 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 THAP9Q9H5L6 903 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 SLC39A2Q9NP94 309 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 MAGEC2Q9UBF1 373 aaPredicted RBP23.14■■□□□ 1.29
USP39-203ENST00000409470 KIAA1024Q9UPX6 916 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 SMCHD1A6NHR9 2005 aa23.14■■□□□ 1.29
USP39-203ENST00000409470 ATAD5Q96QE3 1844 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 PSDA5PKW4 1024 aaPredicted RBP23.13■■□□□ 1.29
USP39-203ENST00000409470 SLC26A4O43511 780 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 SSBP05455 408 aaKnown RBP eCLIP23.13■■□□□ 1.29
USP39-203ENST00000409470 PBX1P40424 430 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 KIF4BQ2VIQ3 1234 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 NOC3LQ8WTT2 800 aaKnown RBP23.13■■□□□ 1.29
USP39-203ENST00000409470 LENG9Q96B70 501 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 BAG1Q99933 345 aaPredicted RBP23.13■■□□□ 1.29
USP39-203ENST00000409470 AKR1B15C9JRZ8 316 aaPredicted RBP23.13■■□□□ 1.29
USP39-203ENST00000409470 CYP3A4P08684 503 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 CSGALNACT2Q8N6G5 542 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 KIAA0895Q8NCT3 520 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 TBC1D5Q92609 795 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 FAM20AQ96MK3 541 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 DEFB129Q9H1M3 183 aa23.13■■□□□ 1.29
USP39-203ENST00000409470 POTEB3A0JP26 581 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 POTECB2RU33 542 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 ABCB11O95342 1321 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 EEF1GP26641 437 aaKnown RBP23.12■■□□□ 1.29
USP39-203ENST00000409470 COBLL1Q53SF7 1204 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 CEP135Q66GS9 1140 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 HAUS3Q68CZ6 603 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 NCAPH2Q6IBW4 605 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 POTEBQ6S5H4 581 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 IRF2BP1Q8IU81 584 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 MYRIPQ8NFW9 859 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 ERMNQ8TAM6 284 aa23.12■■□□□ 1.29
USP39-203ENST00000409470 BMP2KQ9NSY1 1161 aaPredicted RBP23.12■■□□□ 1.29
USP39-203ENST00000409470 CTNND1O60716 968 aaKnown RBP23.11■■□□□ 1.29
USP39-203ENST00000409470 PTGER2P43116 358 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 NYAP1Q6ZVC0 841 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 LDHDQ86WU2 507 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 PPP1R13BQ96KQ4 1090 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 E9PMD0 336 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 MSH4O15457 936 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 ARHGAP6O43182 974 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 CCP110O43303 1012 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 INPP5BP32019 993 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 RBL2Q08999 1139 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 ANKRD40Q6AI12 368 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 TMEM139Q8IV31 216 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 NLGN2Q8NFZ4 835 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 CPLX3Q8WVH0 158 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 ZNF592Q92610 1267 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 DUSP9Q99956 384 aaKnown RBP23.11■■□□□ 1.29
USP39-203ENST00000409470 EHMT1Q9H9B1 1298 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 GINM1Q9NU53 330 aa23.11■■□□□ 1.29
USP39-203ENST00000409470 ITIH6Q6UXX5 1313 aa23.1■■□□□ 1.29
USP39-203ENST00000409470 WDR46O15213 610 aaKnown RBP23.1■■□□□ 1.29
USP39-203ENST00000409470 MED24O75448 989 aa23.1■■□□□ 1.29
USP39-203ENST00000409470 PLA2G4BP0C869 781 aa23.1■■□□□ 1.29
USP39-203ENST00000409470 SPIRE1Q08AE8 756 aa23.1■■□□□ 1.29
USP39-203ENST00000409470 CYP2W1Q8TAV3 490 aa23.1■■□□□ 1.29
USP39-203ENST00000409470 LPAR1Q92633 364 aa23.1■■□□□ 1.29
USP39-203ENST00000409470 ZNF541Q9H0D2 1346 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms