RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 NCOA5Q9HCD5 579 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 MRVI1Q9Y6F6 885 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 PRPF3O43395 683 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 CABYRO75952 493 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 RGS20O76081 388 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 CPT1AP50416 773 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 AKAP17AQ02040 695 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 TLE2Q04725 743 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 UBE2SQ16763 222 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 PFKFB3Q16875 520 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 PPP1R18Q6NYC8 613 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 PHKBQ93100 1093 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 BARHL2Q9NY43 387 aa20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-206ENST00000409141 STXBP3O00186 592 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 GH1P01241 217 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 SCG2P13521 617 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 STK3Q13188 491 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 NTRK3Q16288 839 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 C8orf34Q49A92 452 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 TYW1BQ6NUM6 668 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 CHRDL2Q6WN34 429 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 ALDH8A1Q9H2A2 487 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 RIC8AQ9NPQ8 531 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 PRKAG2Q9UGJ0 569 aa20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 DDX41Q9UJV9 622 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-206ENST00000409141 FRMPD4Q14CM0 1322 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 A0A0U1RQG5 324 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 SMCO2A6NFE2 343 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 MYL3P08590 195 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 IFNAR1P17181 557 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 ADCY7P51828 1080 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 KCNV1Q6PIU1 500 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 IL17RAQ96F46 866 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 SLC26A6Q9BXS9 759 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 POLR3EQ9NVU0 708 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 RTEL1Q9NZ71 1219 aa20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 COLQQ9Y215 455 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-206ENST00000409141 A6NJR5 290 aa20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 CPLX1O14810 134 aa20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 PQBP1O60828 265 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 STAM2O75886 525 aa20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 MRPS9P82933 396 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 ANKRD1Q15327 319 aa20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 XRRA1Q6P2D8 792 aa20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 RNF26Q9BY78 433 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 PRDM5Q9NQX1 630 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 PCDHA6Q9UN73 950 aa20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 PCDHA8Q9Y5H6 950 aa20.59■□□□□ 0.89
PDLIM2-206ENST00000409141 DCDC2CA8MYV0 355 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 ARVCFO00192 962 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 TGFB3P10600 412 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 ARHGAP1Q07960 439 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 PKN1Q16512 942 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 GNPTABQ3T906 1256 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 PCNX4Q63HM2 1172 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 DHX37Q8IY37 1157 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 GLT8D2Q9H1C3 349 aa20.58■□□□□ 0.89
PDLIM2-206ENST00000409141 CDK7P50613 346 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 PSMC6P62333 389 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 PURAQ00577 322 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 SSRP1Q08945 709 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 CPLX2Q6PUV4 134 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 ANKRD33Q7Z3H0 272 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 TEX2Q8IWB9 1127 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 TRIM22Q8IYM9 498 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 TOX2Q96NM4 488 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 INPP4AQ96PE3 977 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 SLKQ9H2G2 1235 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 PCDH10Q9P2E7 1040 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 KIAA1217Q5T5P2 1943 aa20.57■□□□□ 0.88
PDLIM2-206ENST00000409141 KPNA6O60684 536 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 FOSP01100 380 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 CLTBP09497 229 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 NEK4P51957 841 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 AK2P54819 239 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 ITGA7Q13683 1181 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 LAMC2Q13753 1193 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 CCDC12Q8WUD4 166 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 MTG1Q9BT17 334 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 PDLIM7Q9NR12 457 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 TPCN1Q9ULQ1 816 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 MROH7Q68CQ1 1323 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 SORBS3O60504 671 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 MAGEA10P43363 369 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 SP2Q02086 613 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 SH3RF1Q7Z6J0 888 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 NLRX1Q86UT6 975 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 EMID1Q96A84 441 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 LBHD1Q9BQE6 289 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 C6orf50Q9HD87 102 aa20.56■□□□□ 0.88
PDLIM2-206ENST00000409141 DNAH12Q6ZR08 3092 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 SPATA31C2B4DYI2 1134 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 GGPS1O95749 300 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 MMP3P08254 477 aa20.55■□□□□ 0.88
PDLIM2-206ENST00000409141 ICAM3P32942 547 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms