RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 PABPC4Q13310 644 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC85A-201ENST00000407595 RAPGEF1Q13905 1077 aa17.34■□□□□ 0.37
CCDC85A-201ENST00000407595 BICD1Q96G01 975 aa17.34■□□□□ 0.37
CCDC85A-201ENST00000407595 KIAA1024Q9UPX6 916 aa17.34■□□□□ 0.37
CCDC85A-201ENST00000407595 XRN1Q8IZH2 1706 aaKnown RBP17.34■□□□□ 0.37
CCDC85A-201ENST00000407595 ATP1A1P05023 1023 aaKnown RBP17.33■□□□□ 0.37
CCDC85A-201ENST00000407595 AMIGO3Q86WK7 504 aa17.33■□□□□ 0.37
CCDC85A-201ENST00000407595 SUPT20HQ8NEM7 779 aa17.33■□□□□ 0.37
CCDC85A-201ENST00000407595 RPGRIP1Q96KN7 1286 aa17.33■□□□□ 0.37
CCDC85A-201ENST00000407595 MMS19Q96T76 1030 aa17.33■□□□□ 0.37
CCDC85A-201ENST00000407595 AGXT2Q9BYV1 514 aa17.33■□□□□ 0.37
CCDC85A-201ENST00000407595 TCP11X2Q5H9J9 407 aa17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 SELENOOQ9BVL4 669 aa17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 HPSEQ9Y251 543 aa17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 A0A087WUV0 522 aaPredicted RBP17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 VEGFAP15692 232 aaPredicted RBP17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 RSRC2Q7L4I2 434 aaKnown RBP17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 CPLX4Q7Z7G2 160 aa17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 EFCAB13Q8IY85 973 aa17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 DYDC1Q8WWB3 177 aa17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 ADD3Q9UEY8 706 aaKnown RBP17.33■□□□□ 0.36
CCDC85A-201ENST00000407595 E7EVH7 732 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 ZNF185O15231 689 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 FLOT1O75955 427 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 DDR1Q08345 913 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 PFKFB3Q16875 520 aaPredicted RBP17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 PICK1Q9NRD5 415 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 PLCG1P19174 1290 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 UBLCP1Q8WVY7 318 aaPredicted RBP17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 TSGA10Q9BZW7 698 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 GYPCP04921 128 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 NF2P35240 595 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 MAP2K2P36507 400 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 TROAPQ12815 778 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 HPS3Q969F9 1004 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 TRIM31Q9BZY9 425 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 KANSL2Q9H9L4 492 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 L1RE1Q9UN81 338 aa17.32■□□□□ 0.36
CCDC85A-201ENST00000407595 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 RASA1P20936 1047 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 POTEDQ86YR6 584 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 TRIM58Q8NG06 486 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 NUP58Q9BVL2 599 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 PDCLQ13371 301 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 TADA2BQ86TJ2 420 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 IFT20Q8IY31 132 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 NBPF3Q9H094 633 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 PCDHB13Q9Y5F0 798 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 SALL1Q9NSC2 1324 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 GUCY2DQ02846 1103 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 CCDC65Q8IXS2 484 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 TCHPQ9BT92 498 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 ANKZF1Q9H8Y5 726 aa17.31■□□□□ 0.36
CCDC85A-201ENST00000407595 MOCS3O95396 460 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 TDP2O95551 362 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 BMP6P22004 513 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 FAM212AQ96EL1 285 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 NOX5Q96PH1 765 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 FAM169AQ9Y6X4 670 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 PRCPP42785 496 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 NHEJ1Q9H9Q4 299 aaPredicted RBP17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 SLIT3O75094 1523 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 CHD2O14647 1828 aaKnown RBP17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 LRRIQ3A6PVS8 624 aaPredicted RBP17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 USP14P54578 494 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 CEP85LQ5SZL2 805 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 SMCR8Q8TEV9 937 aaPredicted RBP17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 CCDC169A6NNP5 214 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 GCNT3O95395 438 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 CDC42EP5Q6NZY7 148 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 PAGR1Q9BTK6 254 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 RWDD2AQ9UIY3 292 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 DNM3Q9UQ16 869 aa17.3■□□□□ 0.36
CCDC85A-201ENST00000407595 BMP3P12645 472 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 TAL1P17542 331 aaPredicted RBP17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 RASSF7Q02833 373 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 ZNF658Q5TYW1 1059 aaPredicted RBP17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 MYCT1Q8N699 235 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 CCDC17Q96LX7 622 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 GBP2P32456 591 aaPredicted RBP17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 ASPRV1Q53RT3 343 aa17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 CNOT6LQ96LI5 555 aaKnown RBP17.29■□□□□ 0.36
CCDC85A-201ENST00000407595 RIC1Q4ADV7 1423 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms