RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PRR5P85299 388 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 FZD5Q13467 585 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 NTRK3Q16288 839 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 C2orf27AQ580R0 203 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 OLFML2BQ68BL8 750 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 WWC2Q6AWC2 1192 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 IQCEQ6IPM2 695 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 ZC3H14Q6PJT7 736 aaKnown RBP7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 FILIP1Q7Z7B0 1213 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 ANKLE2Q86XL3 938 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 HOMER1Q86YM7 354 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 PPIL6Q8IXY8 311 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 LRRC56Q8IYG6 542 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 DIO2Q92813 273 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 IER2Q9BTL4 223 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 SPC25Q9HBM1 224 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 RXFP1Q9HBX9 757 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 X6R8D5 127 aa7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 ARID1BQ8NFD5 2236 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P13-201ENST00000406019 MEFVO15553 781 aaPredicted RBP7□□□□□ -1.29
HMGB1P13-201ENST00000406019 DNAJC6O75061 913 aa7□□□□□ -1.29
HMGB1P13-201ENST00000406019 RAB11FIP3O75154 756 aa7□□□□□ -1.29
HMGB1P13-201ENST00000406019 IBSPP21815 317 aaPredicted RBP7□□□□□ -1.29
HMGB1P13-201ENST00000406019 LTBRP36941 435 aa7□□□□□ -1.29
HMGB1P13-201ENST00000406019 ZNF200P98182 395 aaPredicted RBP7□□□□□ -1.29
HMGB1P13-201ENST00000406019 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
HMGB1P13-201ENST00000406019 THAP3Q8WTV1 239 aaPredicted RBP7□□□□□ -1.29
HMGB1P13-201ENST00000406019 SIGLEC10Q96LC7 697 aa7□□□□□ -1.29
HMGB1P13-201ENST00000406019 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
HMGB1P13-201ENST00000406019 PCDH12Q9NPG4 1184 aa7□□□□□ -1.29
HMGB1P13-201ENST00000406019 SIRT5Q9NXA8 310 aa7□□□□□ -1.29
HMGB1P13-201ENST00000406019 F8W031 263 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 AGRPO00253 132 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 DIAPH1O60610 1272 aaKnown RBP6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 FUCA1P04066 466 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 FPR2P25090 351 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 MTERF2Q49AM1 385 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 C16orf86Q6ZW13 317 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 AMIGO3Q86WK7 504 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 RIOX2Q8IUF8 465 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 TEX2Q8IWB9 1127 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 PANK1Q8TE04 598 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 TOX2Q96NM4 488 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 SPATA9Q9BWV2 254 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 MARCH2Q9P0N8 246 aa6.99□□□□□ -1.29
HMGB1P13-201ENST00000406019 IQCA1LA6NCM1 817 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 MSCO60682 206 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 NTRK1P04629 796 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 PABPC1P11940 636 aaKnown RBP6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 ATF2P15336 505 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 PI3P19957 117 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 BCL6P41182 706 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 KCNJ6P48051 423 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 GYS2P54840 703 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 NCKAP1LP55160 1127 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 RPL11P62913 178 aaKnown RBP6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 TMEM132EQ6IEE7 984 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 DACT3Q96B18 629 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 SLKQ9H2G2 1235 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 SIT1Q9Y3P8 196 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 KCTD3Q9Y597 815 aa6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 TIMM13Q9Y5L4 95 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P13-201ENST00000406019 C22orf46C9J442 243 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 ASGR2P07307 311 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 SLC6A11P48066 632 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 FOXB2Q5VYV0 432 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 FAM129CQ86XR2 697 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 LRRC47Q8N1G4 583 aaKnown RBP6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 FEZ1Q99689 392 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 BCAS3Q9H6U6 928 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 KDM2BQ8NHM5 1336 aa6.97□□□□□ -1.29
HMGB1P13-201ENST00000406019 A0A1W2PQJ5 194 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 PPP1R12AO14974 1030 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 SGSM2O43147 1006 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 PRODHO43272 600 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 PMLP29590 882 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 ANAPC15P60006 121 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 TKFCQ3LXA3 575 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 RPUSD2Q8IZ73 545 aaKnown RBP6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 PEX11GQ96HA9 241 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 RNF38Q9H0F5 515 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 GPR27Q9NS67 375 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 CNOT6Q9ULM6 557 aaKnown RBP6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 IRAK3Q9Y616 596 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 PTCH2Q9Y6C5 1203 aa6.96□□□□□ -1.3
HMGB1P13-201ENST00000406019 TRAV20A0A0B4J274 112 aa6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 C6orf222P0C671 652 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 HTRA3P83110 453 aa6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 AMPD3Q01432 767 aa6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 SLC9A5Q14940 896 aa6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 RSPO2Q6UXX9 243 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 CABP7Q86V35 215 aa6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 SYNPOQ8N3V7 929 aa6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 CPA5Q8WXQ8 436 aa6.95□□□□□ -1.3
HMGB1P13-201ENST00000406019 METTL14Q9HCE5 456 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms