RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 ASIC1P78348 528 aa32.5■■■□□ 2.79
CSNK1E-205ENST00000405675 KIAA1683Q9H0B3 1180 aa32.5■■■□□ 2.79
CSNK1E-205ENST00000405675 PIK3CDO00329 1044 aa32.49■■■□□ 2.79
CSNK1E-205ENST00000405675 NR1I3Q14994 352 aa32.49■■■□□ 2.79
CSNK1E-205ENST00000405675 FAM160B2Q86V87 743 aa32.49■■■□□ 2.79
CSNK1E-205ENST00000405675 LENG9Q96B70 501 aa32.49■■■□□ 2.79
CSNK1E-205ENST00000405675 PICK1Q9NRD5 415 aa32.49■■■□□ 2.79
CSNK1E-205ENST00000405675 FEM1BQ9UK73 627 aa32.49■■■□□ 2.79
CSNK1E-205ENST00000405675 R3HCC1Q9Y3T6 440 aaKnown RBP32.49■■■□□ 2.79
CSNK1E-205ENST00000405675 A0A1B0GTH6 734 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 POTECB2RU33 542 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 USP2O75604 605 aaPredicted RBP32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 PTPRAP18433 802 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 PRR16Q569H4 304 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 SV2BQ7L1I2 683 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 LARP4BQ92615 738 aaKnown RBP32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 RAD54LQ92698 747 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 DOCK1Q14185 1865 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 MYMKA6NI61 221 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 FAM86B1E9PN63 330 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 FAM86B2P0C5J1 330 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 SFPQP23246 707 aaKnown RBP eCLIP32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 ETNPPLQ8TBG4 499 aa32.48■■■□□ 2.79
CSNK1E-205ENST00000405675 AMPD3Q01432 767 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 SPP2Q13103 211 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 MTMR2Q13614 643 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 TPD52L1Q16890 204 aaPredicted RBP32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 FCHSD1Q86WN1 690 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 TAF1DQ9H5J8 278 aaPredicted RBP32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 TRIM49BA6NDI0 452 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 PMS1P54277 932 aaKnown RBP32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 PDE4DQ08499 809 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 GOLGA8FQ08AF8 430 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 GOLGA8DPQ0D2H9 430 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 Q4G0T1 1027 aa32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 EAPPQ56P03 285 aaPredicted RBP32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 DNTTIP2Q5QJE6 756 aaKnown RBP32.47■■■□□ 2.79
CSNK1E-205ENST00000405675 STAT3P40763 770 aa32.46■■■□□ 2.79
CSNK1E-205ENST00000405675 SEMA3FQ13275 785 aa32.46■■■□□ 2.79
CSNK1E-205ENST00000405675 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.46■■■□□ 2.79
CSNK1E-205ENST00000405675 ZC3H15Q8WU90 426 aaKnown RBP32.46■■■□□ 2.79
CSNK1E-205ENST00000405675 TEX33O43247 280 aa32.45■■■□□ 2.79
CSNK1E-205ENST00000405675 CFBP00751 764 aa32.45■■■□□ 2.79
CSNK1E-205ENST00000405675 TBX2Q13207 712 aaPredicted RBP32.45■■■□□ 2.79
CSNK1E-205ENST00000405675 EXOC1Q9NV70 894 aa32.45■■■□□ 2.79
CSNK1E-205ENST00000405675 STK4Q13043 487 aa32.45■■■□□ 2.78
CSNK1E-205ENST00000405675 WDR18Q9BV38 432 aa32.45■■■□□ 2.78
CSNK1E-205ENST00000405675 ADD3Q9UEY8 706 aaKnown RBP32.45■■■□□ 2.78
CSNK1E-205ENST00000405675 ZHX2Q9Y6X8 837 aa32.45■■■□□ 2.78
CSNK1E-205ENST00000405675 FCER1AP12319 257 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 CIITAP33076 1130 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 CCT6AP40227 531 aaKnown RBP32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 TRAF1Q13077 416 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 CYP2W1Q8TAV3 490 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 HPS3Q969F9 1004 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 EMILIN3Q9NT22 766 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 IQCA1LA6NCM1 817 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 LDHDQ86WU2 507 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 ZNF280CQ8ND82 737 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 LPAR1Q92633 364 aa32.44■■■□□ 2.78
CSNK1E-205ENST00000405675 USP27XA6NNY8 438 aa32.43■■■□□ 2.78
CSNK1E-205ENST00000405675 HYIQ5T013 277 aa32.43■■■□□ 2.78
CSNK1E-205ENST00000405675 SLFN12Q8IYM2 578 aa32.43■■■□□ 2.78
CSNK1E-205ENST00000405675 AS3MTQ9HBK9 375 aa32.43■■■□□ 2.78
CSNK1E-205ENST00000405675 CYP3A4P08684 503 aa32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 SPIRE1Q08AE8 756 aa32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 SPECC1LQ69YQ0 1117 aa32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 DYMQ7RTS9 669 aa32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 CCDC47Q96A33 483 aaKnown RBP32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 GCOM1H8Y6P7 765 aaPredicted RBP32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 WDR46O15213 610 aaKnown RBP32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 POLR2MP0CAP2 368 aa32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 KRT31Q15323 416 aa32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 NOL9Q5SY16 702 aaKnown RBP32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 LIMA1Q9UHB6 759 aaKnown RBP32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 MRPL11Q9Y3B7 192 aaKnown RBP32.42■■■□□ 2.78
CSNK1E-205ENST00000405675 BACE1P56817 501 aa32.41■■■□□ 2.78
CSNK1E-205ENST00000405675 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.41■■■□□ 2.78
CSNK1E-205ENST00000405675 CDCA5Q96FF9 252 aa32.41■■■□□ 2.78
CSNK1E-205ENST00000405675 IRF2BP1Q8IU81 584 aa32.41■■■□□ 2.78
CSNK1E-205ENST00000405675 AGBL1Q96MI9 1066 aa32.41■■■□□ 2.78
CSNK1E-205ENST00000405675 ZNF536O15090 1300 aa32.4■■■□□ 2.78
CSNK1E-205ENST00000405675 PSMA7O14818 248 aa32.4■■■□□ 2.78
CSNK1E-205ENST00000405675 TBX3O15119 743 aa32.4■■■□□ 2.78
CSNK1E-205ENST00000405675 MSH4O15457 936 aa32.4■■■□□ 2.78
CSNK1E-205ENST00000405675 STIM1Q13586 685 aa32.4■■■□□ 2.78
CSNK1E-205ENST00000405675 KIAA0895Q8NCT3 520 aa32.4■■■□□ 2.78
CSNK1E-205ENST00000405675 SCN4AP35499 1836 aa32.4■■■□□ 2.78
CSNK1E-205ENST00000405675 POTEB3A0JP26 581 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 PPP1R12BO60237 982 aaPredicted RBP32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 VCAM1P19320 739 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 MAP3K9P80192 1104 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 VGLL4Q14135 290 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 POTEBQ6S5H4 581 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 UNC13DQ70J99 1090 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 CTAGE1Q96RT6 745 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 KIAA1024Q9UPX6 916 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 KCNJ18B7U540 433 aa32.39■■■□□ 2.78
CSNK1E-205ENST00000405675 MED24O75448 989 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms