RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 ZSCAN26Q16670 478 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 PI16Q6UXB8 463 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 OSBP2Q969R2 916 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 MRFAP1L1Q96HT8 127 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 TNS2Q63HR2 1409 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 USP32Q8NFA0 1604 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 SEPT2Q15019 361 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 SLC25A27O95847 323 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 SURF1Q15526 300 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 CCDC84Q86UT8 332 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 CCDC26Q8TAB7 109 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 NUCKS1Q9H1E3 243 aaKnown RBP12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 PARP2Q9UGN5 583 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 RGS12O14924 1447 aa12.9□□□□□ -0.34
RAPGEF3-204ENST00000405493 PTPREP23469 700 aa12.9□□□□□ -0.35
RAPGEF3-204ENST00000405493 C7orf31Q8N865 590 aa12.9□□□□□ -0.35
RAPGEF3-204ENST00000405493 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.35
RAPGEF3-204ENST00000405493 FOXP1Q9H334 677 aaPredicted RBP12.9□□□□□ -0.35
RAPGEF3-204ENST00000405493 CCL15-CCL14A0A0B4J2E2 113 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 PRPF3O43395 683 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 FCGRTP55899 365 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 CCL15Q16663 113 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 GBP6Q6ZN66 633 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 EEPD1Q7L9B9 569 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 OSBPL5Q9H0X9 879 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 SH3GLB2Q9NR46 395 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 TBC1D22BQ9NU19 505 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 SORBS3O60504 671 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 ANKS4BQ8N8V4 417 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 RMDN3Q96TC7 470 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 ELF1P32519 619 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 FBF1Q8TES7 1133 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 GCNAQ96QF7 691 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 XPO4Q9C0E2 1151 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 ZBTB5O15062 677 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 KIF11P52732 1056 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 CFAP58Q5T655 872 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 SND1Q7KZF4 910 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
RAPGEF3-204ENST00000405493 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 SLC10A5Q5PT55 438 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 ADALQ6DHV7 355 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 B4GALNT4Q76KP1 1039 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 DCP1AQ9NPI6 582 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 TYW5A2RUC4 315 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 RCAN1P53805 252 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 ALX1Q15699 326 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 ARMCX5Q6P1M9 558 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 FAM81BQ96LP2 452 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 PDIA3P30101 505 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 ALCAMQ13740 583 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 RABL6Q3YEC7 729 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 C8orf74Q6P047 294 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 FOXO4P98177 505 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 Q3C1V9 767 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 CSF1RP07333 972 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 ETF1P62495 437 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 KRT76Q01546 638 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 C1orf112Q9NSG2 853 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 DAGLAQ9Y4D2 1042 aa12.88□□□□□ -0.35
RAPGEF3-204ENST00000405493 LRRC7Q96NW7 1537 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 FAM170AA1A519 330 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 IFNAR1P17181 557 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 NAP1L3Q99457 506 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 TMTC1Q8IUR5 882 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 MMS19Q96T76 1030 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 TXNDC16Q9P2K2 825 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 A6NNZ2 444 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 HMGCS2P54868 508 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 SCRN1Q12765 414 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 CUL4AQ13619 759 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 BRD3Q15059 726 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 TUBB8Q3ZCM7 444 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 DCUN1D2Q6PH85 259 aa12.87□□□□□ -0.35
RAPGEF3-204ENST00000405493 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms