RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 MROH7Q68CQ1 1323 aa30.35■■■□□ 2.45
HDAC11-206ENST00000405025 FRMPD4Q14CM0 1322 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 GOLGA8AA7E2F4 631 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 GOLGA8BA8MQT2 603 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 ARHGAP1Q07960 439 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 APOBRQ0VD83 1088 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 FUT2Q10981 343 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 USP17L6PQ6QN14 398 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 VSIG10LQ86VR7 867 aa30.34■■■□□ 2.45
HDAC11-206ENST00000405025 FAM217BQ9NTX9 383 aaPredicted RBP30.34■■■□□ 2.45
HDAC11-206ENST00000405025 RBM28Q9NW13 759 aaKnown RBP30.34■■■□□ 2.45
HDAC11-206ENST00000405025 A6NJR5 290 aa30.33■■■□□ 2.45
HDAC11-206ENST00000405025 RPS6KB1P23443 525 aa30.33■■■□□ 2.45
HDAC11-206ENST00000405025 CDC27P30260 824 aa30.33■■■□□ 2.45
HDAC11-206ENST00000405025 GPKOWQ92917 476 aaPredicted RBP eCLIP30.33■■■□□ 2.45
HDAC11-206ENST00000405025 USP26Q9BXU7 913 aa30.33■■■□□ 2.45
HDAC11-206ENST00000405025 POLR3EQ9NVU0 708 aa30.33■■■□□ 2.45
HDAC11-206ENST00000405025 DDX41Q9UJV9 622 aaKnown RBP30.33■■■□□ 2.45
HDAC11-206ENST00000405025 SCN10AQ9Y5Y9 1956 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 LAMA3Q16787 3333 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 MEIS2O14770 477 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 GH1P01241 217 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 RAG1P15918 1043 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 FGD1P98174 961 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 PPP1R13LQ8WUF5 828 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 AFG1LQ8WV93 481 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 BRF1Q92994 677 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 LRCH3Q96II8 777 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 NAP1L2Q9ULW6 460 aaPredicted RBP30.32■■■□□ 2.44
HDAC11-206ENST00000405025 MRVI1Q9Y6F6 885 aa30.32■■■□□ 2.44
HDAC11-206ENST00000405025 CD4P01730 458 aa30.31■■■□□ 2.44
HDAC11-206ENST00000405025 CASTP20810 708 aaKnown RBP30.31■■■□□ 2.44
HDAC11-206ENST00000405025 CCND2P30279 289 aa30.31■■■□□ 2.44
HDAC11-206ENST00000405025 SMARCC2Q8TAQ2 1214 aa30.31■■■□□ 2.44
HDAC11-206ENST00000405025 MTG1Q9BT17 334 aaPredicted RBP30.31■■■□□ 2.44
HDAC11-206ENST00000405025 PIK3CDO00329 1044 aa30.3■■■□□ 2.44
HDAC11-206ENST00000405025 HEATR3Q7Z4Q2 680 aa30.3■■■□□ 2.44
HDAC11-206ENST00000405025 TRPV6Q9H1D0 765 aa30.3■■■□□ 2.44
HDAC11-206ENST00000405025 MYH7BA7E2Y1 1941 aa30.3■■■□□ 2.44
HDAC11-206ENST00000405025 EPB41L2O43491 1005 aaKnown RBP30.29■■■□□ 2.44
HDAC11-206ENST00000405025 MMP3P08254 477 aa30.29■■■□□ 2.44
HDAC11-206ENST00000405025 EPHB4P54760 987 aa30.29■■■□□ 2.44
HDAC11-206ENST00000405025 MRPS9P82933 396 aaKnown RBP30.29■■■□□ 2.44
HDAC11-206ENST00000405025 BRDTQ58F21 947 aaPredicted RBP30.29■■■□□ 2.44
HDAC11-206ENST00000405025 C9orf50Q5SZB4 431 aa30.29■■■□□ 2.44
HDAC11-206ENST00000405025 WWC2Q6AWC2 1192 aa30.29■■■□□ 2.44
HDAC11-206ENST00000405025 CUL5Q93034 780 aa30.29■■■□□ 2.44
HDAC11-206ENST00000405025 PSTPIP2Q9H939 334 aa30.29■■■□□ 2.44
HDAC11-206ENST00000405025 TLR3O15455 904 aaKnown RBP30.28■■■□□ 2.44
HDAC11-206ENST00000405025 SORBS3O60504 671 aa30.28■■■□□ 2.44
HDAC11-206ENST00000405025 B4GALT4O60513 344 aa30.28■■■□□ 2.44
HDAC11-206ENST00000405025 RCAN1P53805 252 aa30.28■■■□□ 2.44
HDAC11-206ENST00000405025 UBE2SQ16763 222 aa30.28■■■□□ 2.44
HDAC11-206ENST00000405025 TYW1BQ6NUM6 668 aa30.28■■■□□ 2.44
HDAC11-206ENST00000405025 TIMP1P01033 207 aa30.27■■■□□ 2.44
HDAC11-206ENST00000405025 PSMA5P28066 241 aa30.27■■■□□ 2.44
HDAC11-206ENST00000405025 METAP2P50579 478 aaKnown RBP eCLIP30.27■■■□□ 2.44
HDAC11-206ENST00000405025 SP2Q02086 613 aa30.27■■■□□ 2.44
HDAC11-206ENST00000405025 SHHQ15465 462 aa30.27■■■□□ 2.44
HDAC11-206ENST00000405025 LRIT3Q3SXY7 679 aa30.27■■■□□ 2.44
HDAC11-206ENST00000405025 AGXT2Q9BYV1 514 aa30.27■■■□□ 2.44
HDAC11-206ENST00000405025 PPP1R12CQ9BZL4 782 aa30.27■■■□□ 2.44
HDAC11-206ENST00000405025 V9GY48 417 aaPredicted RBP30.27■■■□□ 2.44
HDAC11-206ENST00000405025 SZT2Q5T011 3432 aa30.26■■■□□ 2.43
HDAC11-206ENST00000405025 ADD1P35611 737 aaKnown RBP30.26■■■□□ 2.43
HDAC11-206ENST00000405025 NBPF20Q3BBV1 942 aa30.26■■■□□ 2.43
HDAC11-206ENST00000405025 FBXL16Q8N461 479 aa30.26■■■□□ 2.43
HDAC11-206ENST00000405025 EMID1Q96A84 441 aaPredicted RBP30.26■■■□□ 2.43
HDAC11-206ENST00000405025 ALDH8A1Q9H2A2 487 aaPredicted RBP30.26■■■□□ 2.43
HDAC11-206ENST00000405025 KPNA6O60684 536 aa30.25■■■□□ 2.43
HDAC11-206ENST00000405025 UBA1P22314 1058 aaKnown RBP30.25■■■□□ 2.43
HDAC11-206ENST00000405025 TRMT13Q9NUP7 481 aaKnown RBP30.25■■■□□ 2.43
HDAC11-206ENST00000405025 RTEL1Q9NZ71 1219 aa30.25■■■□□ 2.43
HDAC11-206ENST00000405025 NID2Q14112 1375 aa30.25■■■□□ 2.43
HDAC11-206ENST00000405025 UMODL1Q5DID0 1318 aa30.24■■■□□ 2.43
HDAC11-206ENST00000405025 FPGSQ05932 587 aa30.24■■■□□ 2.43
HDAC11-206ENST00000405025 SEMA3FQ13275 785 aa30.24■■■□□ 2.43
HDAC11-206ENST00000405025 RUFY3Q7L099 469 aa30.24■■■□□ 2.43
HDAC11-206ENST00000405025 DHX37Q8IY37 1157 aaKnown RBP30.24■■■□□ 2.43
HDAC11-206ENST00000405025 INPP4AQ96PE3 977 aaPredicted RBP30.24■■■□□ 2.43
HDAC11-206ENST00000405025 SEZ6LQ9BYH1 1024 aa30.24■■■□□ 2.43
HDAC11-206ENST00000405025 BCAS3Q9H6U6 928 aa30.24■■■□□ 2.43
HDAC11-206ENST00000405025 ZSWIM6Q9HCJ5 1215 aa30.24■■■□□ 2.43
HDAC11-206ENST00000405025 DOCK5Q9H7D0 1870 aa30.23■■■□□ 2.43
HDAC11-206ENST00000405025 GGPS1O95749 300 aa30.23■■■□□ 2.43
HDAC11-206ENST00000405025 CYP2C18P33260 490 aa30.23■■■□□ 2.43
HDAC11-206ENST00000405025 LAMC2Q13753 1193 aa30.23■■■□□ 2.43
HDAC11-206ENST00000405025 CELF3Q5SZQ8 465 aaKnown RBP30.23■■■□□ 2.43
HDAC11-206ENST00000405025 KCNV1Q6PIU1 500 aa30.23■■■□□ 2.43
HDAC11-206ENST00000405025 KAT2BQ92831 832 aa30.23■■■□□ 2.43
HDAC11-206ENST00000405025 STXBP3O00186 592 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 NAPAP54920 295 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 CHMP4BP1P59074 171 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 TOB2Q14106 344 aaPredicted RBP30.22■■■□□ 2.43
HDAC11-206ENST00000405025 FAM47CQ5HY64 1035 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 MYSM1Q5VVJ2 828 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 PCNX4Q63HM2 1172 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 MFSD5Q6N075 450 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 PPTC7Q8NI37 304 aa30.22■■■□□ 2.43
HDAC11-206ENST00000405025 UPF3BQ9BZI7 483 aaKnown RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms