RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DDX25Q9UHL0 483 aaKnown RBP23.75■■□□□ 1.39
TPM1-208ENST00000404484 CENPFP49454 3210 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 CYP3A7-CYP3A51PA0A087WV96 503 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 CYP3A7P24462 503 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 ARHGAP4P98171 946 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 TMEM266Q2M3C6 531 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 KRBA2Q6ZNG9 492 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 CNNM3Q8NE01 707 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 ATG4CQ96DT6 458 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 AGBL1Q96MI9 1066 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 RAB34Q9BZG1 259 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 ADAMTS5Q9UNA0 930 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 MYH7BA7E2Y1 1941 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 POLR2DO15514 142 aaKnown RBP23.74■■□□□ 1.39
TPM1-208ENST00000404484 TDP2O95551 362 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 TAL1P17542 331 aaPredicted RBP23.74■■□□□ 1.39
TPM1-208ENST00000404484 GHRHRQ02643 423 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 KIF22Q14807 665 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 IL17AQ16552 155 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 POTEDQ86YR6 584 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 CPXCR1Q8N123 301 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 RAVER2Q9HCJ3 691 aaKnown RBP23.74■■□□□ 1.39
TPM1-208ENST00000404484 RABGAP1Q9Y3P9 1069 aa23.74■■□□□ 1.39
TPM1-208ENST00000404484 HOXA13P31271 388 aaPredicted RBP23.73■■□□□ 1.39
TPM1-208ENST00000404484 PSMC4P43686 418 aa23.73■■□□□ 1.39
TPM1-208ENST00000404484 GCLCP48506 637 aaPredicted RBP23.73■■□□□ 1.39
TPM1-208ENST00000404484 TYRO3Q06418 890 aa23.73■■□□□ 1.39
TPM1-208ENST00000404484 FBXO46Q6PJ61 603 aaPredicted RBP23.73■■□□□ 1.39
TPM1-208ENST00000404484 CRYGNQ8WXF5 182 aa23.73■■□□□ 1.39
TPM1-208ENST00000404484 EPSTI1Q96J88 318 aa23.73■■□□□ 1.39
TPM1-208ENST00000404484 MTMR9Q96QG7 549 aa23.73■■□□□ 1.39
TPM1-208ENST00000404484 CYP3A4P08684 503 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 ALAS1P13196 640 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 HSD17B4P51659 736 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 HERVK_113P62684 666 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 ARHGEF6Q15052 776 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 ZRSR1Q15695 479 aaKnown RBP23.72■■□□□ 1.39
TPM1-208ENST00000404484 POTEEQ6S8J3 1075 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 TRIM47Q96LD4 638 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 MBOAT7Q96N66 472 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 MAF1Q9H063 256 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 PTPN22Q9Y2R2 807 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 RLFQ13129 1914 aa23.72■■□□□ 1.39
TPM1-208ENST00000404484 ATP2A1O14983 1001 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 SLC37A4O43826 429 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 EDIL3O43854 480 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 PEX10O60683 326 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 CAVIN2O95810 425 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 UBA7P41226 1012 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 FXR2P51116 673 aaKnown RBP eCLIP23.71■■□□□ 1.39
TPM1-208ENST00000404484 TKFCQ3LXA3 575 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 LONRF3Q496Y0 759 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 USP49Q70CQ1 688 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 FCHSD1Q86WN1 690 aa23.71■■□□□ 1.39
TPM1-208ENST00000404484 MARCH6O60337 910 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 CIITAP33076 1130 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 FAM110CQ1W6H9 321 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 CEP57L1Q8IYX8 460 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 IQUBQ8NA54 791 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 REPS2Q8NFH8 660 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 CLEC4DQ8WXI8 215 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 CCSER1Q9C0I3 900 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 TXNRD2Q9NNW7 524 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 KIAA1468Q9P260 1216 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 RBPJLQ9UBG7 517 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 SMCHD1A6NHR9 2005 aa23.7■■□□□ 1.38
TPM1-208ENST00000404484 RBBP6Q7Z6E9 1792 aaKnown RBP23.7■■□□□ 1.38
TPM1-208ENST00000404484 CAPN15O75808 1086 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 STX1AQ16623 288 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 Q4G0T1 1027 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 MB21D1Q8N884 522 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 CCDC39Q9UFE4 941 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 SPDYE16A6NNV3 312 aaPredicted RBP23.69■■□□□ 1.38
TPM1-208ENST00000404484 TBX3O15119 743 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 ACTN4O43707 911 aaKnown RBP23.69■■□□□ 1.38
TPM1-208ENST00000404484 GNRH1P01148 92 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 SLFN14P0C7P3 912 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 PDIA5Q14554 519 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 SLFN12Q8IYM2 578 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 PDILTQ8N807 584 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 TRERF1Q96PN7 1200 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 TEX13BQ9BXU2 312 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 RBSNQ9H1K0 784 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 SERTAD1Q9UHV2 236 aa23.69■■□□□ 1.38
TPM1-208ENST00000404484 ZSWIM8A7E2V4 1837 aa23.68■■□□□ 1.38
TPM1-208ENST00000404484 ZNF76P36508 570 aa23.68■■□□□ 1.38
TPM1-208ENST00000404484 TXKP42681 527 aa23.68■■□□□ 1.38
TPM1-208ENST00000404484 IGSF22Q8N9C0 903 aa23.68■■□□□ 1.38
TPM1-208ENST00000404484 DHX58Q96C10 678 aa23.68■■□□□ 1.38
TPM1-208ENST00000404484 ANO10Q9NW15 660 aa23.68■■□□□ 1.38
TPM1-208ENST00000404484 MORF4L1Q9UBU8 362 aa23.68■■□□□ 1.38
TPM1-208ENST00000404484 NFIBO00712 420 aa23.67■■□□□ 1.38
TPM1-208ENST00000404484 FCGRTP55899 365 aa23.67■■□□□ 1.38
TPM1-208ENST00000404484 Q3C1V9 767 aa23.67■■□□□ 1.38
TPM1-208ENST00000404484 SNRNP48Q6IEG0 339 aaKnown RBP23.67■■□□□ 1.38
TPM1-208ENST00000404484 RASSF8Q8NHQ8 419 aa23.67■■□□□ 1.38
TPM1-208ENST00000404484 TBC1D5Q92609 795 aa23.67■■□□□ 1.38
TPM1-208ENST00000404484 PANK2Q9BZ23 570 aa23.67■■□□□ 1.38
TPM1-208ENST00000404484 RNF146Q9NTX7 359 aa23.67■■□□□ 1.38
TPM1-208ENST00000404484 ZNF214Q9UL59 606 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms