RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 ALAS1P13196 640 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 RASA1P20936 1047 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 CHMP4BP1P59074 171 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 EPC2Q52LR7 807 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 MKL1Q969V6 931 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 SAMD11Q96NU1 681 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 NSUN3Q9H649 340 aaKnown RBP11.06□□□□□ -0.64
NUP43-204ENST00000403890 MKNK2Q9HBH9 465 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 VPS9D1Q9Y2B5 631 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 TRIP12Q14669 1992 aaPredicted RBP11.06□□□□□ -0.64
NUP43-204ENST00000403890 SCN10AQ9Y5Y9 1956 aa11.06□□□□□ -0.64
NUP43-204ENST00000403890 PTPRSQ13332 1948 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 A6NJR5 290 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 TMEM232C9JQI7 657 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 H3BNC9 293 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 NBNO60934 754 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 BMP3P12645 472 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 TRIM27P14373 513 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 LTBRP36941 435 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 STAT2P52630 851 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 GPM6BQ13491 265 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 TCTN1Q2MV58 587 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 FBXL6Q8N531 539 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 ZNF454Q8N9F8 522 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 GMCL1P1Q8NEA9 526 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 CHURC1Q8WUH1 139 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 ATOH1Q92858 354 aaPredicted RBP11.05□□□□□ -0.64
NUP43-204ENST00000403890 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
NUP43-204ENST00000403890 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
NUP43-204ENST00000403890 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
NUP43-204ENST00000403890 SYNPO2Q9UMS6 1093 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 SLC4A4Q9Y6R1 1079 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
NUP43-204ENST00000403890 SIP14410 1827 aa11.05□□□□□ -0.64
NUP43-204ENST00000403890 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 STXBP3O00186 592 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 NKRFO15226 690 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUP43-204ENST00000403890 MBTPS2O43462 519 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 RGS20O76081 388 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 ADD2P35612 726 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 HTRA4P83105 476 aaPredicted RBP11.04□□□□□ -0.64
NUP43-204ENST00000403890 IKQ13123 557 aaPredicted RBP11.04□□□□□ -0.64
NUP43-204ENST00000403890 CTC1Q2NKJ3 1217 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 SLFNL1Q499Z3 407 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 MUM1L1Q5H9M0 696 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 SLFN13Q68D06 897 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 RPAINQ86UA6 219 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 FAM160B2Q86V87 743 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
NUP43-204ENST00000403890 CLUAP1Q96AJ1 413 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
NUP43-204ENST00000403890 CTAGE1Q96RT6 745 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 ARPP21Q9UBL0 812 aaPredicted RBP11.04□□□□□ -0.64
NUP43-204ENST00000403890 C5orf42Q9H799 3197 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 ZBED9Q6R2W3 1325 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
NUP43-204ENST00000403890 LOC102724159A0A0B4J2E5 919 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 IGKV6D-41A0A0C4DH26 115 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 TTLL1O95922 423 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 AMHP03971 560 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 CKBP12277 381 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 ZXDAP98168 799 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 RBL2Q08999 1139 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 PPP2R5BQ15173 497 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
NUP43-204ENST00000403890 CLUL1Q15846 466 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 GDF6Q6KF10 455 aaPredicted RBP11.03□□□□□ -0.64
NUP43-204ENST00000403890 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.03□□□□□ -0.643e-6■■■□□ 15.6
NUP43-204ENST00000403890 STK11IPQ8N1F8 1099 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 STAG1Q8WVM7 1258 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 DHX38Q92620 1227 aaKnown RBP11.03□□□□□ -0.64
NUP43-204ENST00000403890 CEP95Q96GE4 821 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.645e-7■■□□□ 12.6
NUP43-204ENST00000403890 ALG13Q9NP73 1137 aaKnown RBP11.03□□□□□ -0.64
NUP43-204ENST00000403890 MTMR4Q9NYA4 1195 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 TNNQ9UQP3 1299 aa11.03□□□□□ -0.64
NUP43-204ENST00000403890 GOLGA8CPA6NN73 597 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 PROB1E7EW31 1015 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 PDE4AP27815 886 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 ALDH5A1P51649 535 aaPredicted RBP11.02□□□□□ -0.65
NUP43-204ENST00000403890 DLX2Q07687 328 aaPredicted RBP11.02□□□□□ -0.65
NUP43-204ENST00000403890 SMAD4Q13485 552 aaKnown RBP11.02□□□□□ -0.65
NUP43-204ENST00000403890 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 PPP1R15BQ5SWA1 713 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 SESTD1Q86VW0 696 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 TMEM192Q8IY95 271 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 MYOCDQ8IZQ8 938 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.65
NUP43-204ENST00000403890 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 FRAT1Q92837 279 aaPredicted RBP11.02□□□□□ -0.65
NUP43-204ENST00000403890 C1orf115Q9H7X2 142 aa11.02□□□□□ -0.65
NUP43-204ENST00000403890 CACNA1GO43497 2377 aa11.01□□□□□ -0.65
NUP43-204ENST00000403890 MINDY4BA8MYZ0 360 aa11.01□□□□□ -0.65
NUP43-204ENST00000403890 PLA2G6O60733 806 aa11.01□□□□□ -0.65
NUP43-204ENST00000403890 LGR5O75473 907 aa11.01□□□□□ -0.65
NUP43-204ENST00000403890 AVPR2P30518 371 aa11.01□□□□□ -0.65
NUP43-204ENST00000403890 SLC1A4P43007 532 aa11.01□□□□□ -0.65
NUP43-204ENST00000403890 SNAP25P60880 206 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms