RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ALDH8A1Q9H2A2 487 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-203ENST00000400772 GH1P01241 217 aa18.33■□□□□ 0.52
ATG4B-203ENST00000400772 BRDTQ58F21 947 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-203ENST00000400772 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.52
ATG4B-203ENST00000400772 Q7L0L9 218 aa18.33■□□□□ 0.52
ATG4B-203ENST00000400772 PPP1R13LQ8WUF5 828 aa18.33■□□□□ 0.52
ATG4B-203ENST00000400772 ZFP91Q96JP5 570 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-203ENST00000400772 PPP1R12CQ9BZL4 782 aa18.33■□□□□ 0.52
ATG4B-203ENST00000400772 BRPF3Q9ULD4 1205 aa18.33■□□□□ 0.52
ATG4B-203ENST00000400772 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 SCN10AQ9Y5Y9 1956 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 KPNA6O60684 536 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 MMP3P08254 477 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 CSF2RAP15509 400 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 CYP2C18P33260 490 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 HSPA4P34932 840 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 NBPF20Q3BBV1 942 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 MICU3Q86XE3 530 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 CCDC82Q8N4S0 544 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 EMID1Q96A84 441 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-203ENST00000400772 TRMT13Q9NUP7 481 aaKnown RBP18.32■□□□□ 0.52
ATG4B-203ENST00000400772 MRVI1Q9Y6F6 885 aa18.32■□□□□ 0.52
ATG4B-203ENST00000400772 FRMPD4Q14CM0 1322 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 LAMA2P24043 3122 aaKnown RBP18.31■□□□□ 0.52
ATG4B-203ENST00000400772 hCG_1642624A0A1W2PR95 340 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 MEIS2O14770 477 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 NEFLP07196 543 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 CPA1P15085 419 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 SP2Q02086 613 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 KRT32Q14532 448 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 APOA5Q6Q788 366 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 DEFB123Q8N688 67 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 KAT2BQ92831 832 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 GPKOWQ92917 476 aaPredicted RBP eCLIP18.31■□□□□ 0.52
ATG4B-203ENST00000400772 NOC4LQ9BVI4 516 aaKnown RBP18.31■□□□□ 0.52
ATG4B-203ENST00000400772 HIPK3Q9H422 1215 aa18.31■□□□□ 0.52
ATG4B-203ENST00000400772 SEC63Q9UGP8 760 aaKnown RBP18.31■□□□□ 0.52
ATG4B-203ENST00000400772 PIK3CDO00329 1044 aa18.3■□□□□ 0.52
ATG4B-203ENST00000400772 CCND2P30279 289 aa18.3■□□□□ 0.52
ATG4B-203ENST00000400772 MRPS9P82933 396 aaKnown RBP18.3■□□□□ 0.52
ATG4B-203ENST00000400772 FUT2Q10981 343 aa18.3■□□□□ 0.52
ATG4B-203ENST00000400772 NFRKBQ6P4R8 1299 aa18.3■□□□□ 0.52
ATG4B-203ENST00000400772 TMEM199Q8N511 208 aa18.3■□□□□ 0.52
ATG4B-203ENST00000400772 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
ATG4B-203ENST00000400772 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.3■□□□□ 0.525e-7■□□□□ 11.3
ATG4B-203ENST00000400772 FAM217BQ9NTX9 383 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-203ENST00000400772 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
ATG4B-203ENST00000400772 ACRP10323 421 aa18.29■□□□□ 0.52
ATG4B-203ENST00000400772 PPIGQ13427 754 aaKnown RBP eCLIP18.29■□□□□ 0.521e-10■□□□□ 10.9
ATG4B-203ENST00000400772 LAMC2Q13753 1193 aa18.29■□□□□ 0.52
ATG4B-203ENST00000400772 TMEM240Q5SV17 173 aa18.29■□□□□ 0.52
ATG4B-203ENST00000400772 CELF3Q5SZQ8 465 aaKnown RBP18.29■□□□□ 0.52
ATG4B-203ENST00000400772 MYSM1Q5VVJ2 828 aa18.29■□□□□ 0.52
ATG4B-203ENST00000400772 SYNE3Q6ZMZ3 975 aa18.29■□□□□ 0.52
ATG4B-203ENST00000400772 PPTC7Q8NI37 304 aa18.29■□□□□ 0.52
ATG4B-203ENST00000400772 WNT8AQ9H1J5 351 aa18.29■□□□□ 0.52
ATG4B-203ENST00000400772 ZBTB43O43298 467 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
ATG4B-203ENST00000400772 TGFB3P10600 412 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 CYP2C9P11712 490 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 CASTP20810 708 aaKnown RBP18.28■□□□□ 0.52
ATG4B-203ENST00000400772 FAM109BQ6ICB4 259 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-203ENST00000400772 KCNV1Q6PIU1 500 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 DHX37Q8IY37 1157 aaKnown RBP18.28■□□□□ 0.52
ATG4B-203ENST00000400772 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 VWCEQ96DN2 955 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 BCAS3Q9H6U6 928 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 RBM28Q9NW13 759 aaKnown RBP18.28■□□□□ 0.52
ATG4B-203ENST00000400772 MTMR10Q9NXD2 777 aa18.28■□□□□ 0.52
ATG4B-203ENST00000400772 CNTNAP5Q8WYK1 1306 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 SORBS3O60504 671 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 SUPT20HL2P0C7V6 817 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 HOXD8P13378 290 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-203ENST00000400772 UBA1P22314 1058 aaKnown RBP18.27■□□□□ 0.52
ATG4B-203ENST00000400772 CDC27P30260 824 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 ICAM3P32942 547 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 CCL23P55773 120 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 SMAD3P84022 425 aaKnown RBP18.27■□□□□ 0.52
ATG4B-203ENST00000400772 PTPN11Q06124 597 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-203ENST00000400772 SEMA3FQ13275 785 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 DGKDQ16760 1214 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 RTN1Q16799 776 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 FAM47CQ5HY64 1035 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 RASIP1Q5U651 963 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 ZNF365Q70YC5 407 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 CUL5Q93034 780 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 JAKMIP1Q96N16 626 aaKnown RBP18.27■□□□□ 0.52
ATG4B-203ENST00000400772 INPP4AQ96PE3 977 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-203ENST00000400772 CTAGE1Q96RT6 745 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 PSTPIP2Q9H939 334 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 IL23AQ9NPF7 189 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 RTEL1Q9NZ71 1219 aa18.27■□□□□ 0.52
ATG4B-203ENST00000400772 MYH7BA7E2Y1 1941 aa18.27■□□□□ 0.51
ATG4B-203ENST00000400772 KLF18A0A0U1RQI7 1052 aa18.26■□□□□ 0.51
ATG4B-203ENST00000400772 SPATA31C2B4DYI2 1134 aa18.26■□□□□ 0.51
ATG4B-203ENST00000400772 STAM2O75886 525 aa18.26■□□□□ 0.51
ATG4B-203ENST00000400772 GGPS1O95749 300 aa18.26■□□□□ 0.51
ATG4B-203ENST00000400772 HSDL1Q3SXM5 330 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms